Difference between revisions of "TSS:Mm 100575.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.01 |distance= |distance_to_tss=17946 |end=120766266 |entrez_id=19719 |gc_percent=0.547264 |gene_alias=- |gene_description=RFNG O-fucosylp...") |
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|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=17946 | |distance_to_tss=17946 | ||
|end=120766266 | |end=120766266 | ||
| + | |end_of_center_position=120766258 | ||
|entrez_id=19719 | |entrez_id=19719 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| Line 18: | Line 19: | ||
|species=mouse | |species=mouse | ||
|start=120766249 | |start=120766249 | ||
| + | |start_of_center_position=120766257 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=54(CCTTTTATAGAG,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:20, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 120766257 |
|---|---|
| End of the center position in the TSS region: | 120766258 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 17946 |
|---|---|
| Nearest PromoterID: | NM_009053 |
| Entrez ID: | 19719 |
| Nearest Unigene: | Mm.871 |
| Nearest Refseq: | NM_009053 |
| Nearest Ensembl: | ENSMUSG00000025158 |
| Gene Name: | Rfng |
| Gene Alias: | - |
| Gene Description: | RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 54(CCTTTTATAGAG,+,0.00) |
