Difference between revisions of "TSS:Mm 10058.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000161737.7:0 NM_008288 | + | |all_trans=ENSMUST00000161737.7:0 NM_008288:0 X83202:0 BC132364:22 BC138780:22 BC145415:22 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_008288 | |nearest_refseq=NM_008288 | ||
|nearest_unigene=Mm.28328 | |nearest_unigene=Mm.28328 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=mouse | |species=mouse | ||
|start=193264006 | |start=193264006 | ||
|start_of_center_position=193264042 | |start_of_center_position=193264042 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000161737.7 NM_008288 | + | |transcript_name=ENSMUST00000161737.7 NM_008288 X83202 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_10058.1 | |tss_id=mm_10058.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q4JHD9 |
}} | }} | ||
Revision as of 16:20, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 193264042 |
|---|---|
| End of the center position in the TSS region: | 193264043 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000161737.7 NM_008288 X83202 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000161737.7:0 NM_008288:0 X83202:0 BC132364:22 BC138780:22 BC145415:22 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_008288 |
| Entrez ID: | 15483 |
| Nearest Unigene: | Mm.28328 |
| Nearest Refseq: | NM_008288 |
| Nearest Ensembl: | ENSMUSG00000016194 |
| Gene Name: | hydroxysteroid 11-beta dehydrogenase 1 |
| Gene Alias: | - |
| Gene Description: | hydroxysteroid 11-beta dehydrogenase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
