Difference between revisions of "TSS:Mm 100585.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Mct4= | |Mct4= | ||
| − | |all_trans=NM_030696 | + | |all_trans=NM_030696:-60 BC046525:-60 ENSMUST00000070653.12:-64 ENSMUST00000154187.7:500 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 10: | Line 10: | ||
|entrez_id=80879 | |entrez_id=80879 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=Mct3 | + | |gene_alias=Mct3{{!}}Mct4 |
| − | |gene_description= | + | |gene_description=solute carrier family 16 (monocarboxylic acid transporters), member 3 |
|gene_id=80879 | |gene_id=80879 | ||
| − | |gene_name= | + | |gene_name=solute carrier family 16 (monocarboxylic acid transporters), member 3 |
|gene_source=MGI:1933438 | |gene_source=MGI:1933438 | ||
|gene_symbol=Slc16a3 | |gene_symbol=Slc16a3 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_030696 | |nearest_refseq=NM_030696 | ||
|nearest_unigene=Mm.28632 | |nearest_unigene=Mm.28632 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=120948543 | |start=120948543 | ||
|start_of_center_position=120948548 | |start_of_center_position=120948548 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_030696 | + | |transcript_name=NM_030696 BC046525 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100585.1 | |tss_id=mm_100585.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q3UDP9 |
}} | }} | ||
Revision as of 16:20, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120948548 |
|---|---|
| End of the center position in the TSS region: | 120948549 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_030696 BC046525 |
|---|---|
| Distance: | -60 |
| Num_trans: | 4 |
| All_trans: | NM_030696:-60 BC046525:-60 ENSMUST00000070653.12:-64 ENSMUST00000154187.7:500 |
TATA-Box annotation
| Distance to TSS: | 64 |
|---|---|
| Nearest PromoterID: | NM_030696 |
| Entrez ID: | 80879 |
| Nearest Unigene: | Mm.28632 |
| Nearest Refseq: | NM_030696 |
| Nearest Ensembl: | ENSMUSG00000025161 |
| Gene Name: | solute carrier family 16 (monocarboxylic acid transporters), member 3 |
| Gene Alias: | Mct3|Mct4 |
| Gene Description: | solute carrier family 16 (monocarboxylic acid transporters), member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
