Difference between revisions of "TSS:Mm 100587.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Mct4= | |Mct4= | ||
| − | |all_trans=AK169917:0 AK165596:13 ENSMUST00000168579.7:-20 AK171260:-20 AK166048:-20 ENSMUST00000129473.7:-30 AK141381:-30 ENSMUST00000100130.9:-34 NM_001038654:-34 NM_001038653 | + | |all_trans=AK169917:0 AK165596:13 ENSMUST00000168579.7:-20 AK171260:-20 AK166048:-20 ENSMUST00000129473.7:-30 AK141381:-30 ENSMUST00000100130.9:-34 NM_001038654:-34 NM_001038653:-34 AK149707:-34 AK149983:-34 ENSMUST00000154187.7:-48 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 10: | Line 10: | ||
|entrez_id=80879 | |entrez_id=80879 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=Mct3 | + | |gene_alias=Mct3{{!}}Mct4 |
| − | |gene_description= | + | |gene_description=solute carrier family 16 (monocarboxylic acid transporters), member 3 |
|gene_id=80879 | |gene_id=80879 | ||
| − | |gene_name= | + | |gene_name=solute carrier family 16 (monocarboxylic acid transporters), member 3 |
|gene_source=MGI:1933438 | |gene_source=MGI:1933438 | ||
|gene_symbol=Slc16a3 | |gene_symbol=Slc16a3 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=MGI:1933438 | |hgnc_mgi_id=MGI:1933438 | ||
|nearest_ensembl=ENSMUSG00000025161 | |nearest_ensembl=ENSMUSG00000025161 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001038653 |
|nearest_refseq=NM_030696 | |nearest_refseq=NM_030696 | ||
|nearest_unigene=Mm.28632 | |nearest_unigene=Mm.28632 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=mouse | |species=mouse | ||
|start=120949100 | |start=120949100 | ||
Revision as of 16:20, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 120949107 |
|---|---|
| End of the center position in the TSS region: | 120949108 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK169917 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | AK169917:0 AK165596:13 ENSMUST00000168579.7:-20 AK171260:-20 AK166048:-20 ENSMUST00000129473.7:-30 AK141381:-30 ENSMUST00000100130.9:-34 NM_001038654:-34 NM_001038653:-34 AK149707:-34 AK149983:-34 ENSMUST00000154187.7:-48 |
TATA-Box annotation
| Distance to TSS: | 40 |
|---|---|
| Nearest PromoterID: | NM_001038653 |
| Entrez ID: | 80879 |
| Nearest Unigene: | Mm.28632 |
| Nearest Refseq: | NM_030696 |
| Nearest Ensembl: | ENSMUSG00000025161 |
| Gene Name: | solute carrier family 16 (monocarboxylic acid transporters), member 3 |
| Gene Alias: | Mct3|Mct4 |
| Gene Description: | solute carrier family 16 (monocarboxylic acid transporters), member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
