Difference between revisions of "TSS:Mm 100595.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.065 |distance= |distance_to_tss=-56 |end=120991395 |entrez_id=104318 |gc_percent=0.621891 |gene_alias=1200006A05Rik|AA409348|D930010H05Ri...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AA409348= | ||
| + | |D930010H05Rik= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-56 | |distance_to_tss=-56 | ||
|end=120991395 | |end=120991395 | ||
| + | |end_of_center_position=120991389 | ||
|entrez_id=104318 | |entrez_id=104318 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=1200006A05Rik | + | |gene_alias=1200006A05Rik{{!}}AA409348{{!}}D930010H05Rik |
| − | |gene_description= | + | |gene_description=casein kinase 1, delta |
|gene_name=Csnk1d | |gene_name=Csnk1d | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000025162 | |nearest_ensembl=ENSMUSG00000025162 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_139059 |
|nearest_refseq=NM_027874 | |nearest_refseq=NM_027874 | ||
|nearest_unigene=Mm.216227 | |nearest_unigene=Mm.216227 | ||
| Line 18: | Line 21: | ||
|species=mouse | |species=mouse | ||
|start=120991382 | |start=120991382 | ||
| + | |start_of_center_position=120991388 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:20, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120991388 |
|---|---|
| End of the center position in the TSS region: | 120991389 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -56 |
|---|---|
| Nearest PromoterID: | NM_139059 |
| Entrez ID: | 104318 |
| Nearest Unigene: | Mm.216227 |
| Nearest Refseq: | NM_027874 |
| Nearest Ensembl: | ENSMUSG00000025162 |
| Gene Name: | Csnk1d |
| Gene Alias: | 1200006A05Rik|AA409348|D930010H05Rik |
| Gene Description: | casein kinase 1, delta |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
