Difference between revisions of "TSS:Mm 100598.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000038831.14:0 ENSMUST00000106117.7:0 NM_001001333 | + | |all_trans=ENSMUST00000038831.14:0 ENSMUST00000106117.7:0 NM_001001333:0 AK154237:19 ENSMUST00000124925.7:317 BC056487:317 ENSMUST00000128913.7:334 ENSMUST00000131009.1:360 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 9: | Line 9: | ||
|entrez_id=238023 | |entrez_id=238023 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=BC069960 | + | |gene_alias=BC069960{{!}}Hexd |
| − | |gene_description= | + | |gene_description=hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing |
|gene_id=238023 | |gene_id=238023 | ||
| − | |gene_name= | + | |gene_name=hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing |
|gene_source=MGI:3605542 | |gene_source=MGI:3605542 | ||
|gene_symbol=Hexdc | |gene_symbol=Hexdc | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001001333 | |nearest_refseq=NM_001001333 | ||
|nearest_unigene=Mm.275130 | |nearest_unigene=Mm.275130 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=121204420 | |start=121204420 | ||
|start_of_center_position=121204430 | |start_of_center_position=121204430 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000038831.14 ENSMUST00000106117.7 NM_001001333 | + | |transcript_name=ENSMUST00000038831.14 ENSMUST00000106117.7 NM_001001333 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100598.1 | |tss_id=mm_100598.1 | ||
Revision as of 16:20, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 121204430 |
|---|---|
| End of the center position in the TSS region: | 121204431 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000038831.14 ENSMUST00000106117.7 NM_001001333 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000038831.14:0 ENSMUST00000106117.7:0 NM_001001333:0 AK154237:19 ENSMUST00000124925.7:317 BC056487:317 ENSMUST00000128913.7:334 ENSMUST00000131009.1:360 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NM_001001333 |
| Entrez ID: | 238023 |
| Nearest Unigene: | Mm.275130 |
| Nearest Refseq: | NM_001001333 |
| Nearest Ensembl: | ENSMUSG00000039307 |
| Gene Name: | hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing |
| Gene Alias: | BC069960|Hexd |
| Gene Description: | hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
