Difference between revisions of "TSS:Mm 100602.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC016090:-9 AK013432:-28 AK079778:-49 ENSMUST00000103015.3:-53 AK081305:-53 AK076232:-53 NM_026272 | + | |all_trans=BC016090:-9 AK013432:-28 AK079778:-49 ENSMUST00000103015.3:-53 AK081305:-53 AK076232:-53 NM_026272:-70 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_026272 | |nearest_refseq=NM_026272 | ||
|nearest_unigene=Mm.291832 | |nearest_unigene=Mm.291832 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=mouse | |species=mouse | ||
|start=121237305 | |start=121237305 | ||
Revision as of 16:20, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 121237311 |
|---|---|
| End of the center position in the TSS region: | 121237312 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC016090 |
|---|---|
| Distance: | -9 |
| Num_trans: | 7 |
| All_trans: | BC016090:-9 AK013432:-28 AK079778:-49 ENSMUST00000103015.3:-53 AK081305:-53 AK076232:-53 NM_026272:-70 |
TATA-Box annotation
| Distance to TSS: | 75 |
|---|---|
| Nearest PromoterID: | NM_026272 |
| Entrez ID: | 67608 |
| Nearest Unigene: | Mm.291832 |
| Nearest Refseq: | NM_026272 |
| Nearest Ensembl: | ENSMUSG00000000056 |
| Gene Name: | nuclear prelamin A recognition factor |
| Gene Alias: | 4430402O11Rik |
| Gene Description: | nuclear prelamin A recognition factor |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
