Difference between revisions of "TSS:Mm 100614.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.03 |distance= |distance_to_tss=-86 |end=121519436 |entrez_id=319530 |gc_percent=0.572139 |gene_alias=A030007D23Rik|Znf750 |gene_descripti...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Znf750= | ||
| + | |all_trans=LF231782:-342 MA467359:-342 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=-342 |
|distance_to_tss=-86 | |distance_to_tss=-86 | ||
|end=121519436 | |end=121519436 | ||
| + | |end_of_center_position=121519429 | ||
|entrez_id=319530 | |entrez_id=319530 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias=A030007D23Rik | + | |gene_alias=A030007D23Rik{{!}}Znf750 |
|gene_description=zinc finger protein 750 | |gene_description=zinc finger protein 750 | ||
|gene_name=Zfp750 | |gene_name=Zfp750 | ||
| Line 15: | Line 18: | ||
|nearest_refseq=NM_178763 | |nearest_refseq=NM_178763 | ||
|nearest_unigene=Mm.11395 | |nearest_unigene=Mm.11395 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=mouse | |species=mouse | ||
|start=121519420 | |start=121519420 | ||
| + | |start_of_center_position=121519428 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF231782 MA467359 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_100614.1 | |tss_id=mm_100614.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:21, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 121519428 |
|---|---|
| End of the center position in the TSS region: | 121519429 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | LF231782 MA467359 |
|---|---|
| Distance: | -342 |
| Num_trans: | 2 |
| All_trans: | LF231782:-342 MA467359:-342 |
TATA-Box annotation
| Distance to TSS: | -86 |
|---|---|
| Nearest PromoterID: | NM_178763 |
| Entrez ID: | 319530 |
| Nearest Unigene: | Mm.11395 |
| Nearest Refseq: | NM_178763 |
| Nearest Ensembl: | ENSMUSG00000039238 |
| Gene Name: | Zfp750 |
| Gene Alias: | A030007D23Rik|Znf750 |
| Gene Description: | zinc finger protein 750 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
