Difference between revisions of "TSS:Mm 100657.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000081318.12:0 ENSMUST00000144778.7:0 ENSMUST00000144359.7:0 ENSMUST00000138126.7:0 ENSMUST00000142315.7:0 ENSMUST00000118627.1:0 AK133558:0 AK129159:0 BC099677:0 BC046305:0 AK170090:0 BC106124:0 AK082866:0 ENSMUST00000132893.7:-10 AK046135:-10 AK046373:-10 ENSMUST00000066391.13:-13 NM_030207:- | + | |all_trans=ENSMUST00000081318.12:0 ENSMUST00000144778.7:0 ENSMUST00000144359.7:0 ENSMUST00000138126.7:0 ENSMUST00000142315.7:0 ENSMUST00000118627.1:0 AK133558:0 AK129159:0 BC099677:0 BC046305:0 AK170090:0 BC106124:0 AK082866:0 ENSMUST00000132893.7:-10 AK046135:-10 AK046373:-10 ENSMUST00000066391.13:-13 AB341343:121 NM_030207:-153 LF225570:159 MA461147:159 AB341344:-230 AB341341:292 LF225573:-490 MA461150:-490 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=184 |
|end=3193450 | |end=3193450 | ||
|end_of_center_position=3193420 | |end_of_center_position=3193420 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=Sfi1 homolog, spindle assembly associated (yeast) |
|gene_id=78887 | |gene_id=78887 | ||
| − | |gene_name= | + | |gene_name=Sfi1 homolog, spindle assembly associated (yeast) |
|gene_source=MGI:1926137 | |gene_source=MGI:1926137 | ||
|gene_symbol=Sfi1 | |gene_symbol=Sfi1 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_030207 | |nearest_refseq=NM_030207 | ||
|nearest_unigene=Mm.394071 | |nearest_unigene=Mm.394071 | ||
| − | |num_trans= | + | |num_trans=25 |
|species=mouse | |species=mouse | ||
|start=3193388 | |start=3193388 | ||
Revision as of 16:22, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3193419 |
|---|---|
| End of the center position in the TSS region: | 3193420 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000081318.12 ENSMUST00000144778.7 ENSMUST00000144359.7 ENSMUST00000138126.7 ENSMUST00000142315.7 ENSMUST00000118627.1 AK133558 AK129159 BC099677 BC046305 AK170090 BC106124 AK082866 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | ENSMUST00000081318.12:0 ENSMUST00000144778.7:0 ENSMUST00000144359.7:0 ENSMUST00000138126.7:0 ENSMUST00000142315.7:0 ENSMUST00000118627.1:0 AK133558:0 AK129159:0 BC099677:0 BC046305:0 AK170090:0 BC106124:0 AK082866:0 ENSMUST00000132893.7:-10 AK046135:-10 AK046373:-10 ENSMUST00000066391.13:-13 AB341343:121 NM_030207:-153 LF225570:159 MA461147:159 AB341344:-230 AB341341:292 LF225573:-490 MA461150:-490 |
TATA-Box annotation
| Distance to TSS: | 184 |
|---|---|
| Nearest PromoterID: | NM_030207 |
| Entrez ID: | 78887 |
| Nearest Unigene: | Mm.394071 |
| Nearest Refseq: | NM_030207 |
| Nearest Ensembl: | ENSMUSG00000023764 |
| Gene Name: | Sfi1 homolog, spindle assembly associated (yeast) |
| Gene Alias: | - |
| Gene Description: | Sfi1 homolog, spindle assembly associated (yeast) |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
