Difference between revisions of "TSS:Mm 100661.1"
From referenceTSS
| Line 2: | Line 2: | ||
|AI132520= | |AI132520= | ||
|Nedd3= | |Nedd3= | ||
| − | |all_trans=BC039649:-27 AK080814:-30 | + | |all_trans=BC039649:-27 AK080814:-30 D10715:-33 AK144438:-34 ENSMUST00000166162.7:-39 ENSMUST00000020741.11:-40 ENSMUST00000132159.1:-40 AK044194:-40 AK155061:-45 ENSMUST00000125424.1:-62 AK090156:-62 NM_007879:-110 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=-27 | |distance=-27 | ||
| − | |distance_to_tss= | + | |distance_to_tss=115 |
|end=3266353 | |end=3266353 | ||
|end_of_center_position=3266348 | |end_of_center_position=3266348 | ||
|entrez_id=13494 | |entrez_id=13494 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=AA408859 | + | |gene_alias=AA408859{{!}}AI132520{{!}}DRG-1{{!}}NEDD-3{{!}}Nedd3 |
|gene_description=developmentally regulated GTP binding protein 1 | |gene_description=developmentally regulated GTP binding protein 1 | ||
|gene_id=13494 | |gene_id=13494 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_007879 | |nearest_refseq=NM_007879 | ||
|nearest_unigene=Mm.3250 | |nearest_unigene=Mm.3250 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=mouse | |species=mouse | ||
|start=3266342 | |start=3266342 | ||
Revision as of 16:22, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3266347 |
|---|---|
| End of the center position in the TSS region: | 3266348 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC039649 |
|---|---|
| Distance: | -27 |
| Num_trans: | 12 |
| All_trans: | BC039649:-27 AK080814:-30 D10715:-33 AK144438:-34 ENSMUST00000166162.7:-39 ENSMUST00000020741.11:-40 ENSMUST00000132159.1:-40 AK044194:-40 AK155061:-45 ENSMUST00000125424.1:-62 AK090156:-62 NM_007879:-110 |
TATA-Box annotation
| Distance to TSS: | 115 |
|---|---|
| Nearest PromoterID: | NM_007879 |
| Entrez ID: | 13494 |
| Nearest Unigene: | Mm.3250 |
| Nearest Refseq: | NM_007879 |
| Nearest Ensembl: | ENSMUSG00000020457 |
| Gene Name: | developmentally regulated GTP binding protein 1 |
| Gene Alias: | AA408859|AI132520|DRG-1|NEDD-3|Nedd3 |
| Gene Description: | developmentally regulated GTP binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
