Difference between revisions of "TSS:Mm 100663.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.055 |distance= |distance_to_tss=1163 |end=3291630 |entrez_id=56218 |gc_percent=0.577114 |gene_alias=8430401L15Rik|AI447519|Mazr|Patz|Zfp2...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AI447519= | ||
| + | |Mazr= | ||
| + | |Patz= | ||
| + | |Zfp278= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=1163 | |distance_to_tss=1163 | ||
|end=3291630 | |end=3291630 | ||
| + | |end_of_center_position=3291620 | ||
|entrez_id=56218 | |entrez_id=56218 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=8430401L15Rik | + | |gene_alias=8430401L15Rik{{!}}AI447519{{!}}Mazr{{!}}Patz{{!}}Zfp278 |
|gene_description=POZ (BTB) and AT hook containing zinc finger 1 | |gene_description=POZ (BTB) and AT hook containing zinc finger 1 | ||
|gene_name=Patz1 | |gene_name=Patz1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000020453 | |nearest_ensembl=ENSMUSG00000020453 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001253691 |
|nearest_refseq=NM_019574 | |nearest_refseq=NM_019574 | ||
|nearest_unigene=Mm.275563 | |nearest_unigene=Mm.275563 | ||
| Line 18: | Line 23: | ||
|species=mouse | |species=mouse | ||
|start=3291609 | |start=3291609 | ||
| + | |start_of_center_position=3291619 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:22, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 3291619 |
|---|---|
| End of the center position in the TSS region: | 3291620 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1163 |
|---|---|
| Nearest PromoterID: | NM_001253691 |
| Entrez ID: | 56218 |
| Nearest Unigene: | Mm.275563 |
| Nearest Refseq: | NM_019574 |
| Nearest Ensembl: | ENSMUSG00000020453 |
| Gene Name: | Patz1 |
| Gene Alias: | 8430401L15Rik|AI447519|Mazr|Patz|Zfp278 |
| Gene Description: | POZ (BTB) and AT hook containing zinc finger 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
