Difference between revisions of "TSS:Mm 100672.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC086629:-31 ENSMUST00000147344.1:-42 AK146099:-51 ENSMUST00000101640.9:-83 ENSMUST00000101642.9:-83 ENSMUST00000134576.7:-83 AB005132:-83 NM_173053:- | + | |all_trans=BC086629:-31 ENSMUST00000147344.1:-42 AK146099:-51 ENSMUST00000101640.9:-83 ENSMUST00000101642.9:-83 ENSMUST00000134576.7:-83 AB005132:-83 NM_173053:-111 NM_001361623:-111 AK208477:167 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=-31 | |distance=-31 | ||
| − | |distance_to_tss= | + | |distance_to_tss=116 |
|end=3371293 | |end=3371293 | ||
|end_of_center_position=3371288 | |end_of_center_position=3371288 | ||
|entrez_id=16886 | |entrez_id=16886 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=Limk-2 | + | |gene_alias=Limk-2{{!}}whe |
|gene_description=LIM motif-containing protein kinase 2 | |gene_description=LIM motif-containing protein kinase 2 | ||
|gene_id=16886 | |gene_id=16886 | ||
Revision as of 16:22, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3371287 |
|---|---|
| End of the center position in the TSS region: | 3371288 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC086629 |
|---|---|
| Distance: | -31 |
| Num_trans: | 10 |
| All_trans: | BC086629:-31 ENSMUST00000147344.1:-42 AK146099:-51 ENSMUST00000101640.9:-83 ENSMUST00000101642.9:-83 ENSMUST00000134576.7:-83 AB005132:-83 NM_173053:-111 NM_001361623:-111 AK208477:167 |
TATA-Box annotation
| Distance to TSS: | 116 |
|---|---|
| Nearest PromoterID: | NM_173053 |
| Entrez ID: | 16886 |
| Nearest Unigene: | Mm.124176 |
| Nearest Refseq: | NM_010718 |
| Nearest Ensembl: | ENSMUSG00000020451 |
| Gene Name: | LIM motif-containing protein kinase 2 |
| Gene Alias: | Limk-2|whe |
| Gene Description: | LIM motif-containing protein kinase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
