Difference between revisions of "TSS:Mm 100677.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000144055.1:0 BC014812:0 AK167455:0 AK149640:0 AK168904:0 AK053358:0 AK034108:0 AK077638:0 AK170680:0 ENSMUST00000077078.11:-11 ENSMUST00000064364.2:-11 AK052436:-11 | + | |all_trans=ENSMUST00000144055.1:0 BC014812:0 AK167455:0 AK149640:0 AK168904:0 AK053358:0 AK034108:0 AK077638:0 AK170680:0 ENSMUST00000077078.11:-11 ENSMUST00000064364.2:-11 AK052436:-11 LF225621:173 MA461198:173 LF225620:287 MA461197:287 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_027820 | |nearest_refseq=NM_027820 | ||
|nearest_unigene=Mm.72795 | |nearest_unigene=Mm.72795 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=mouse | |species=mouse | ||
|start=3452262 | |start=3452262 | ||
Revision as of 16:22, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3452307 |
|---|---|
| End of the center position in the TSS region: | 3452308 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000144055.1 BC014812 AK167455 AK149640 AK168904 AK053358 AK034108 AK077638 AK170680 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENSMUST00000144055.1:0 BC014812:0 AK167455:0 AK149640:0 AK168904:0 AK053358:0 AK034108:0 AK077638:0 AK170680:0 ENSMUST00000077078.11:-11 ENSMUST00000064364.2:-11 AK052436:-11 LF225621:173 MA461198:173 LF225620:287 MA461197:287 |
TATA-Box annotation
| Distance to TSS: | -130 |
|---|---|
| Nearest PromoterID: | NR_028317 |
| Entrez ID: | 71523 |
| Nearest Unigene: | Mm.72795 |
| Nearest Refseq: | NM_027820 |
| Nearest Ensembl: | ENSMUSG00000034587 |
| Gene Name: | ring finger protein 185 |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 8430429K09 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.105 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
