Difference between revisions of "TSS:Mm 100685.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Pipp= | |Pipp= | ||
| − | |all_trans=ENSMUST00000110018.7:-9 ENSMUST00000154756.1:-12 BC022915:-12 AK171029:-18 ENSMUST00000110019.8:-24 AK170114:-24 BC051452:-29 ENSMUST00000183684 | + | |all_trans=ENSMUST00000110018.7:-9 ENSMUST00000154756.1:-12 BC022915:-12 AK171029:-18 ENSMUST00000110019.8:-24 AK170114:-24 BC051452:-29 ENSMUST00000183684.1:-37 AK165718:-37 AK136908:-43 BC131635:-51 BC131634:-54 ENSMUST00000044507.11:-59 NM_172439:-59 AK034272:-59 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 10: | Line 10: | ||
|entrez_id=170835 | |entrez_id=170835 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=Pib5pa | + | |gene_alias=Pib5pa{{!}}Pipp |
|gene_description=inositol polyphosphate 5-phosphatase J | |gene_description=inositol polyphosphate 5-phosphatase J | ||
|gene_id=170835 | |gene_id=170835 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_172439 | |nearest_refseq=NM_172439 | ||
|nearest_unigene=Mm.24313 | |nearest_unigene=Mm.24313 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=mouse | |species=mouse | ||
|start=3504747 | |start=3504747 | ||
Revision as of 16:22, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 3504754 |
|---|---|
| End of the center position in the TSS region: | 3504755 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000110018.7 |
|---|---|
| Distance: | -9 |
| Num_trans: | 15 |
| All_trans: | ENSMUST00000110018.7:-9 ENSMUST00000154756.1:-12 BC022915:-12 AK171029:-18 ENSMUST00000110019.8:-24 AK170114:-24 BC051452:-29 ENSMUST00000183684.1:-37 AK165718:-37 AK136908:-43 BC131635:-51 BC131634:-54 ENSMUST00000044507.11:-59 NM_172439:-59 AK034272:-59 |
TATA-Box annotation
| Distance to TSS: | 66 |
|---|---|
| Nearest PromoterID: | NM_172439 |
| Entrez ID: | 170835 |
| Nearest Unigene: | Mm.24313 |
| Nearest Refseq: | NM_172439 |
| Nearest Ensembl: | ENSMUSG00000034570 |
| Gene Name: | inositol polyphosphate 5-phosphatase J |
| Gene Alias: | Pib5pa|Pipp |
| Gene Description: | inositol polyphosphate 5-phosphatase J |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
