Difference between revisions of "TSS:Mm 100746.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.13 |distance= |distance_to_tss=196 |end=4135357 |entrez_id=71673 |gc_percent=0.751244 |gene_alias=0610009J22Rik|AW557025|C77903 |gene_des...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AW557025= | ||
| + | |C77903= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=196 | |distance_to_tss=196 | ||
|end=4135357 | |end=4135357 | ||
| + | |end_of_center_position=4135356 | ||
|entrez_id=71673 | |entrez_id=71673 | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
| − | |gene_alias=0610009J22Rik | + | |gene_alias=0610009J22Rik{{!}}AW557025{{!}}C77903 |
|gene_description=ring finger protein 215 | |gene_description=ring finger protein 215 | ||
|gene_name=Rnf215 | |gene_name=Rnf215 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000003581 | |nearest_ensembl=ENSMUSG00000003581 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001363143 |
|nearest_refseq=NM_027859 | |nearest_refseq=NM_027859 | ||
|nearest_unigene=Mm.240586 | |nearest_unigene=Mm.240586 | ||
| Line 18: | Line 21: | ||
|species=mouse | |species=mouse | ||
|start=4135354 | |start=4135354 | ||
| + | |start_of_center_position=4135355 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:24, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 4135355 |
|---|---|
| End of the center position in the TSS region: | 4135356 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 196 |
|---|---|
| Nearest PromoterID: | NM_001363143 |
| Entrez ID: | 71673 |
| Nearest Unigene: | Mm.240586 |
| Nearest Refseq: | NM_027859 |
| Nearest Ensembl: | ENSMUSG00000003581 |
| Gene Name: | Rnf215 |
| Gene Alias: | 0610009J22Rik|AW557025|C77903 |
| Gene Description: | ring finger protein 215 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
