Difference between revisions of "TSS:Mm 100749.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000093381.10:0 ENSMUST00000101626.8 | + | |all_trans=ENSMUST00000093381.10:0 ENSMUST00000101626.8:0 NM_001164620:0 NM_177616:0 AK133165:0 AK220409:13 AK161195:15 ENSMUST00000132712.1:35 AK143216:63 AK076934:67 ENSMUST00000139099.7:69 ENSMUST00000133962.7:69 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| Line 9: | Line 9: | ||
|entrez_id=216516 | |entrez_id=216516 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=4930562D19Rik | + | |gene_alias=4930562D19Rik{{!}}mKIAA1656 |
|gene_description=coiled-coil domain containing 157 | |gene_description=coiled-coil domain containing 157 | ||
|gene_id=216516 | |gene_id=216516 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_177616 | |nearest_refseq=NM_177616 | ||
|nearest_unigene=Mm.386854 | |nearest_unigene=Mm.386854 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=mouse | |species=mouse | ||
|start=4160286 | |start=4160286 | ||
|start_of_center_position=4160295 | |start_of_center_position=4160295 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000093381.10 ENSMUST00000101626.8 NM_177616 | + | |transcript_name=ENSMUST00000093381.10 ENSMUST00000101626.8 NM_001164620 NM_177616 AK133165 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100749.1 | |tss_id=mm_100749.1 | ||
Revision as of 16:24, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 4160295 |
|---|---|
| End of the center position in the TSS region: | 4160296 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000093381.10 ENSMUST00000101626.8 NM_001164620 NM_177616 AK133165 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENSMUST00000093381.10:0 ENSMUST00000101626.8:0 NM_001164620:0 NM_177616:0 AK133165:0 AK220409:13 AK161195:15 ENSMUST00000132712.1:35 AK143216:63 AK076934:67 ENSMUST00000139099.7:69 ENSMUST00000133962.7:69 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_001164620 |
| Entrez ID: | 216516 |
| Nearest Unigene: | Mm.386854 |
| Nearest Refseq: | NM_177616 |
| Nearest Ensembl: | ENSMUSG00000051427 |
| Gene Name: | coiled-coil domain containing 157 |
| Gene Alias: | 4930562D19Rik|mKIAA1656 |
| Gene Description: | coiled-coil domain containing 157 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
