Difference between revisions of "TSS:Mm 100769.1"
From referenceTSS
| Line 2: | Line 2: | ||
|AA960494= | |AA960494= | ||
|Ucrc= | |Ucrc= | ||
| − | |all_trans=ENSMUST00000058407.5:0 NM_197979:0 | + | |all_trans=ENSMUST00000058407.5:0 NM_001362879:0 NM_197979:0 NR_156411:0 AK003881:0 AK012489:0 ENSMUST00000151559.1:1 BC100591:1 BC087874:1 AK002227:2 BC024518:7 AK168491:19 ENSMUST00000130236.1:282 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 11: | Line 11: | ||
|entrez_id=66152 | |entrez_id=66152 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=1110020P15Rik | + | |gene_alias=1110020P15Rik{{!}}AA960494{{!}}Ucrc |
| − | |gene_description= | + | |gene_description=ubiquinol-cytochrome c reductase, complex III subunit X |
|gene_id=66152 | |gene_id=66152 | ||
| − | |gene_name= | + | |gene_name=ubiquinol-cytochrome c reductase, complex III subunit X |
|gene_source=MGI:1913402 | |gene_source=MGI:1913402 | ||
|gene_symbol=Uqcr10 | |gene_symbol=Uqcr10 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=MGI:1913402 | |hgnc_mgi_id=MGI:1913402 | ||
|nearest_ensembl=ENSMUSG00000059534 | |nearest_ensembl=ENSMUSG00000059534 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001362879 |
|nearest_refseq=NM_197979 | |nearest_refseq=NM_197979 | ||
|nearest_unigene=Mm.269736 | |nearest_unigene=Mm.269736 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=mouse | |species=mouse | ||
|start=4704334 | |start=4704334 | ||
|start_of_center_position=4704342 | |start_of_center_position=4704342 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000058407.5 NM_197979 | + | |transcript_name=ENSMUST00000058407.5 NM_001362879 NM_197979 NR_156411 AK003881 AK012489 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100769.1 | |tss_id=mm_100769.1 | ||
Revision as of 16:25, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 4704342 |
|---|---|
| End of the center position in the TSS region: | 4704343 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000058407.5 NM_001362879 NM_197979 NR_156411 AK003881 AK012489 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENSMUST00000058407.5:0 NM_001362879:0 NM_197979:0 NR_156411:0 AK003881:0 AK012489:0 ENSMUST00000151559.1:1 BC100591:1 BC087874:1 AK002227:2 BC024518:7 AK168491:19 ENSMUST00000130236.1:282 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_001362879 |
| Entrez ID: | 66152 |
| Nearest Unigene: | Mm.269736 |
| Nearest Refseq: | NM_197979 |
| Nearest Ensembl: | ENSMUSG00000059534 |
| Gene Name: | ubiquinol-cytochrome c reductase, complex III subunit X |
| Gene Alias: | 1110020P15Rik|AA960494|Ucrc |
| Gene Description: | ubiquinol-cytochrome c reductase, complex III subunit X |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
