Difference between revisions of "TSS:Mm 100786.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000172305.1:-7 ENSMUST00000164190.7:-76 L27090:107 L27105:107 L22987:113 L22988:113 L22989:113 ENSMUST00000056290.12:117 AK197717:-191 L28176:-198 ENSMUST00000053079.12:-247 AK045998:-247 BC005442:-292 ENSMUST00000109910.8:-418 | + | |all_trans=ENSMUST00000172305.1:-7 ENSMUST00000164190.7:-76 L27090:107 L27105:107 L22987:113 L22988:113 L22989:113 ENSMUST00000056290.12:117 AK197717:-191 L28176:-198 ENSMUST00000053079.12:-247 AK045998:-247 BC005442:-292 ENSMUST00000109910.8:-418 KY442315:-418 NM_001252252:-426 NM_010898:-426 NM_001252250:-426 NM_001361675:-426 NM_001361677:-426 NM_001361676:-426 NM_001252251:-426 X74671:-430 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| Line 12: | Line 12: | ||
|gene_description=neurofibromin 2 | |gene_description=neurofibromin 2 | ||
|gene_id=18016 | |gene_id=18016 | ||
| − | |gene_name= | + | |gene_name=neurofibromin 2 |
|gene_source=MGI:97307 | |gene_source=MGI:97307 | ||
|gene_symbol=Nf2 | |gene_symbol=Nf2 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:97307 | |hgnc_mgi_id=MGI:97307 | ||
|nearest_ensembl=ENSMUSG00000009073 | |nearest_ensembl=ENSMUSG00000009073 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001361675 |
|nearest_refseq=NM_010898 | |nearest_refseq=NM_010898 | ||
|nearest_unigene=Mm.297109 | |nearest_unigene=Mm.297109 | ||
Revision as of 16:25, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 4849109 |
|---|---|
| End of the center position in the TSS region: | 4849110 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000172305.1 |
|---|---|
| Distance: | -7 |
| Num_trans: | 23 |
| All_trans: | ENSMUST00000172305.1:-7 ENSMUST00000164190.7:-76 L27090:107 L27105:107 L22987:113 L22988:113 L22989:113 ENSMUST00000056290.12:117 AK197717:-191 L28176:-198 ENSMUST00000053079.12:-247 AK045998:-247 BC005442:-292 ENSMUST00000109910.8:-418 KY442315:-418 NM_001252252:-426 NM_010898:-426 NM_001252250:-426 NM_001361675:-426 NM_001361677:-426 NM_001361676:-426 NM_001252251:-426 X74671:-430 |
TATA-Box annotation
| Distance to TSS: | 434 |
|---|---|
| Nearest PromoterID: | NM_001361675 |
| Entrez ID: | 18016 |
| Nearest Unigene: | Mm.297109 |
| Nearest Refseq: | NM_010898 |
| Nearest Ensembl: | ENSMUSG00000009073 |
| Gene Name: | neurofibromin 2 |
| Gene Alias: | merlin |
| Gene Description: | neurofibromin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
