Difference between revisions of "TSS:Mm 100787.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=L28176:8 AK197717:15 ENSMUST00000053079.12:-22 AK045998:-22 BC005442:-67 ENSMUST00000164190.7:130 ENSMUST00000109910.8:-193 ENSMUST00000172305.1:199 | + | |all_trans=L28176:8 AK197717:15 ENSMUST00000053079.12:-22 AK045998:-22 BC005442:-67 ENSMUST00000164190.7:130 ENSMUST00000109910.8:-193 KY442315:-193 ENSMUST00000172305.1:199 NM_001252252:-201 NM_010898:-201 NM_001252250:-201 NM_001361675:-201 NM_001361677:-201 NM_001361676:-201 NM_001252251:-201 X74671:-205 L27090:329 L27105:329 L22987:335 L22988:335 L22989:335 ENSMUST00000056290.12:339 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
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|gene_description=neurofibromin 2 | |gene_description=neurofibromin 2 | ||
|gene_id=18016 | |gene_id=18016 | ||
| − | |gene_name= | + | |gene_name=neurofibromin 2 |
|gene_source=MGI:97307 | |gene_source=MGI:97307 | ||
|gene_symbol=Nf2 | |gene_symbol=Nf2 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:97307 | |hgnc_mgi_id=MGI:97307 | ||
|nearest_ensembl=ENSMUSG00000009073 | |nearest_ensembl=ENSMUSG00000009073 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001361675 |
|nearest_refseq=NM_010898 | |nearest_refseq=NM_010898 | ||
|nearest_unigene=Mm.297109 | |nearest_unigene=Mm.297109 | ||
Revision as of 16:25, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 4849333 |
|---|---|
| End of the center position in the TSS region: | 4849334 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | L28176 |
|---|---|
| Distance: | 8 |
| Num_trans: | 23 |
| All_trans: | L28176:8 AK197717:15 ENSMUST00000053079.12:-22 AK045998:-22 BC005442:-67 ENSMUST00000164190.7:130 ENSMUST00000109910.8:-193 KY442315:-193 ENSMUST00000172305.1:199 NM_001252252:-201 NM_010898:-201 NM_001252250:-201 NM_001361675:-201 NM_001361677:-201 NM_001361676:-201 NM_001252251:-201 X74671:-205 L27090:329 L27105:329 L22987:335 L22988:335 L22989:335 ENSMUST00000056290.12:339 |
TATA-Box annotation
| Distance to TSS: | 211 |
|---|---|
| Nearest PromoterID: | NM_001361675 |
| Entrez ID: | 18016 |
| Nearest Unigene: | Mm.297109 |
| Nearest Refseq: | NM_010898 |
| Nearest Ensembl: | ENSMUSG00000009073 |
| Gene Name: | neurofibromin 2 |
| Gene Alias: | merlin |
| Gene Description: | neurofibromin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
