Difference between revisions of "TSS:Mm 100810.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Ewsh= | |Ewsh= | ||
| − | |all_trans=ENSMUST00000102930.9:0 AK150345:0 AK153276:0 AK019460:0 AK147909:0 AK147103:-4 BC068226:-5 AK151625:-9 AK034755:-11 AK146791:-13 ENSMUST00000093365.11:-16 ENSMUST00000073308.10:-17 ENSMUST00000151847.1:-17 AK049743:-17 X79233:-27 NM_007968:- | + | |all_trans=ENSMUST00000102930.9:0 AK150345:0 AK153276:0 AK019460:0 AK147909:0 AK147103:-4 BC068226:-5 AK151625:-9 AK034755:-11 AK146791:-13 ENSMUST00000093365.11:-16 ENSMUST00000073308.10:-17 ENSMUST00000151847.1:-17 AK049743:-17 X79233:-27 ENSMUST00000063232.6:-46 NM_001362620:-46 NM_007968:-46 NM_001362617:-46 NM_001362612:-46 NM_001362614:-46 NM_001283062:-46 NM_001283061:-46 NM_001362615:-46 NM_001362613:-46 NM_001362616:-46 NM_001362618:-46 NM_001283063:-46 AK046434:-46 ENSMUST00000079949.12:-216 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=53 |
|end=5099050 | |end=5099050 | ||
|end_of_center_position=5099044 | |end_of_center_position=5099044 | ||
|entrez_id=14030 | |entrez_id=14030 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=Ews | + | |gene_alias=Ews{{!}}Ewsh |
|gene_description=Ewing sarcoma breakpoint region 1 | |gene_description=Ewing sarcoma breakpoint region 1 | ||
|gene_id=14030 | |gene_id=14030 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=MGI:99960 | |hgnc_mgi_id=MGI:99960 | ||
|nearest_ensembl=ENSMUSG00000009079 | |nearest_ensembl=ENSMUSG00000009079 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001362615 |
|nearest_refseq=NM_007968 | |nearest_refseq=NM_007968 | ||
|nearest_unigene=Mm.142822 | |nearest_unigene=Mm.142822 | ||
| − | |num_trans= | + | |num_trans=30 |
|species=mouse | |species=mouse | ||
|start=5099036 | |start=5099036 | ||
Revision as of 16:25, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5099043 |
|---|---|
| End of the center position in the TSS region: | 5099044 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000102930.9 AK150345 AK153276 AK019460 AK147909 |
|---|---|
| Distance: | 0 |
| Num_trans: | 30 |
| All_trans: | ENSMUST00000102930.9:0 AK150345:0 AK153276:0 AK019460:0 AK147909:0 AK147103:-4 BC068226:-5 AK151625:-9 AK034755:-11 AK146791:-13 ENSMUST00000093365.11:-16 ENSMUST00000073308.10:-17 ENSMUST00000151847.1:-17 AK049743:-17 X79233:-27 ENSMUST00000063232.6:-46 NM_001362620:-46 NM_007968:-46 NM_001362617:-46 NM_001362612:-46 NM_001362614:-46 NM_001283062:-46 NM_001283061:-46 NM_001362615:-46 NM_001362613:-46 NM_001362616:-46 NM_001362618:-46 NM_001283063:-46 AK046434:-46 ENSMUST00000079949.12:-216 |
TATA-Box annotation
| Distance to TSS: | 53 |
|---|---|
| Nearest PromoterID: | NM_001362615 |
| Entrez ID: | 14030 |
| Nearest Unigene: | Mm.142822 |
| Nearest Refseq: | NM_007968 |
| Nearest Ensembl: | ENSMUSG00000009079 |
| Gene Name: | Ewing sarcoma breakpoint region 1 |
| Gene Alias: | Ews|Ewsh |
| Gene Description: | Ewing sarcoma breakpoint region 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
