Difference between revisions of "TSS:Mm 100819.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.015 |distance= |distance_to_tss=-25006 |end=5177230 |entrez_id=140703 |gc_percent=0.482587 |gene_alias=AW122071|CO-5|Emu1 |gene_descripti...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CO-5= | ||
| + | |Emu1= | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-24998 |
|end=5177230 | |end=5177230 | ||
| + | |end_of_center_position=5177228 | ||
|entrez_id=140703 | |entrez_id=140703 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
| − | |gene_alias=AW122071 | + | |gene_alias=AW122071{{!}}CO-5{{!}}Emu1 |
|gene_description=EMI domain containing 1 | |gene_description=EMI domain containing 1 | ||
|gene_name=Emid1 | |gene_name=Emid1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000034164 | |nearest_ensembl=ENSMUSG00000034164 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_152138 |
|nearest_refseq=NM_080595 | |nearest_refseq=NM_080595 | ||
|nearest_unigene=Mm.840 | |nearest_unigene=Mm.840 | ||
| Line 18: | Line 21: | ||
|species=mouse | |species=mouse | ||
|start=5177225 | |start=5177225 | ||
| + | |start_of_center_position=5177227 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 16:26, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 5177227 |
|---|---|
| End of the center position in the TSS region: | 5177228 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -24998 |
|---|---|
| Nearest PromoterID: | NR_152138 |
| Entrez ID: | 140703 |
| Nearest Unigene: | Mm.840 |
| Nearest Refseq: | NM_080595 |
| Nearest Ensembl: | ENSMUSG00000034164 |
| Gene Name: | Emid1 |
| Gene Alias: | AW122071|CO-5|Emu1 |
| Gene Description: | EMI domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
