Difference between revisions of "TSS:Mm 100824.1"
From referenceTSS
| Line 2: | Line 2: | ||
|Kremen= | |Kremen= | ||
|Krm1= | |Krm1= | ||
| − | |all_trans=AK141321:102 BC138464:105 BC138465:105 AK081707:108 NM_032396 | + | |all_trans=AK141321:102 BC138464:105 BC138465:105 AK081707:108 NM_032396:113 BC082546:113 ENSMUST00000020662.14:165 AB059617:165 BC049771:189 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 11: | Line 11: | ||
|entrez_id=84035 | |entrez_id=84035 | ||
|gc_percent=0.820896 | |gc_percent=0.820896 | ||
| − | |gene_alias=AV002070 | + | |gene_alias=AV002070{{!}}Kremen{{!}}Krm1 |
|gene_description=kringle containing transmembrane protein 1 | |gene_description=kringle containing transmembrane protein 1 | ||
|gene_id=84035 | |gene_id=84035 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_032396 | |nearest_refseq=NM_032396 | ||
|nearest_unigene=Mm.209989 | |nearest_unigene=Mm.209989 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=5261722 | |start=5261722 | ||
Revision as of 16:26, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5261738 |
|---|---|
| End of the center position in the TSS region: | 5261739 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK141321 |
|---|---|
| Distance: | 102 |
| Num_trans: | 9 |
| All_trans: | AK141321:102 BC138464:105 BC138465:105 AK081707:108 NM_032396:113 BC082546:113 ENSMUST00000020662.14:165 AB059617:165 BC049771:189 |
TATA-Box annotation
| Distance to TSS: | -128 |
|---|---|
| Nearest PromoterID: | NM_032396 |
| Entrez ID: | 84035 |
| Nearest Unigene: | Mm.209989 |
| Nearest Refseq: | NM_032396 |
| Nearest Ensembl: | ENSMUSG00000020393 |
| Gene Name: | kringle containing transmembrane protein 1 |
| Gene Alias: | AV002070|Kremen|Krm1 |
| Gene Description: | kringle containing transmembrane protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.820896 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
