Difference between revisions of "TSS:Mm 100831.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000109867.7:-24 ENSMUST00000143746.2:-24 NM_001080924:-24 | + | |all_trans=ENSMUST00000109867.7:-24 ENSMUST00000143746.2:-24 NM_001080924:-24 AK163639:-24 LF198362:-25 MA433939:-25 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=5444801 | |start_of_center_position=5444801 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000109867.7 ENSMUST00000143746.2 NM_001080924 | + | |transcript_name=ENSMUST00000109867.7 ENSMUST00000143746.2 NM_001080924 AK163639 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100831.1 | |tss_id=mm_100831.1 | ||
Revision as of 16:26, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 5444801 |
|---|---|
| End of the center position in the TSS region: | 5444802 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000109867.7 ENSMUST00000143746.2 NM_001080924 AK163639 |
|---|---|
| Distance: | -24 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000109867.7:-24 ENSMUST00000143746.2:-24 NM_001080924:-24 AK163639:-24 LF198362:-25 MA433939:-25 |
TATA-Box annotation
| Distance to TSS: | 46 |
|---|---|
| Nearest PromoterID: | NM_001080924 |
| Entrez ID: | 407821 |
| Nearest Unigene: | Mm.216313 |
| Nearest Refseq: | NM_001080924 |
| Nearest Ensembl: | ENSMUSG00000041961 |
| Gene Name: | zinc and ring finger 3 |
| Gene Alias: | Gm1167 |
| Gene Description: | zinc and ring finger 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
