Difference between revisions of "TSS:Mm 100842.1"
From referenceTSS
| Line 3: | Line 3: | ||
|AW060359= | |AW060359= | ||
|Urg4= | |Urg4= | ||
| − | |all_trans=AK211020:0 ENSMUST00000140922.1:-7 AK166495:-7 ENSMUST00000093362.11:-11 AK033577:-11 | + | |all_trans=AK211020:0 ENSMUST00000140922.1:-7 AK166495:-7 ENSMUST00000093362.11:-11 AK033577:-11 NM_001361590:-37 NM_001361591:-37 NM_178623:-37 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| Line 12: | Line 12: | ||
|entrez_id=72046 | |entrez_id=72046 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=2010005J08Rik | + | |gene_alias=2010005J08Rik{{!}}9130001I21Rik{{!}}AW060359{{!}}Urg4{{!}}mKIAA1507 |
|gene_description=upregulator of cell proliferation | |gene_description=upregulator of cell proliferation | ||
|gene_id=72046 | |gene_id=72046 | ||
| Line 23: | Line 23: | ||
|mKIAA1507= | |mKIAA1507= | ||
|nearest_ensembl=ENSMUSG00000049680 | |nearest_ensembl=ENSMUSG00000049680 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001361591 |
|nearest_refseq=NM_178623 | |nearest_refseq=NM_178623 | ||
|nearest_unigene=Mm.271657 | |nearest_unigene=Mm.271657 | ||
Revision as of 16:26, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5741128 |
|---|---|
| End of the center position in the TSS region: | 5741129 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK211020 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | AK211020:0 ENSMUST00000140922.1:-7 AK166495:-7 ENSMUST00000093362.11:-11 AK033577:-11 NM_001361590:-37 NM_001361591:-37 NM_178623:-37 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NM_001361591 |
| Entrez ID: | 72046 |
| Nearest Unigene: | Mm.271657 |
| Nearest Refseq: | NM_178623 |
| Nearest Ensembl: | ENSMUSG00000049680 |
| Gene Name: | upregulator of cell proliferation |
| Gene Alias: | 2010005J08Rik|9130001I21Rik|AW060359|Urg4|mKIAA1507 |
| Gene Description: | upregulator of cell proliferation |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
