Difference between revisions of "TSS:Mm 100845.1"
From referenceTSS
| Line 3: | Line 3: | ||
|AW060359= | |AW060359= | ||
|Urg4= | |Urg4= | ||
| − | |all_trans=ENSMUST00000170116.7:0 ENSMUST00000053427.10:0 ENSMUST00000120306.7:0 ENSMUST00000118076.7:0 | + | |all_trans=ENSMUST00000170116.7:0 ENSMUST00000053427.10:0 ENSMUST00000120306.7:0 ENSMUST00000118076.7:0 NM_001361588:0 NM_001361589:0 NM_001077661:0 NM_001361592:0 AK035580:0 AK041953:0 AK037923:0 AK053862:0 BC066994:102 AK129378:270 AK191392:390 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| Line 12: | Line 12: | ||
|entrez_id=72046 | |entrez_id=72046 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=2010005J08Rik | + | |gene_alias=2010005J08Rik{{!}}9130001I21Rik{{!}}AW060359{{!}}Urg4{{!}}mKIAA1507 |
|gene_description=upregulator of cell proliferation | |gene_description=upregulator of cell proliferation | ||
|gene_id=72046 | |gene_id=72046 | ||
| Line 23: | Line 23: | ||
|mKIAA1507= | |mKIAA1507= | ||
|nearest_ensembl=ENSMUSG00000049680 | |nearest_ensembl=ENSMUSG00000049680 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001361588 |
|nearest_refseq=NM_178623 | |nearest_refseq=NM_178623 | ||
|nearest_unigene=Mm.271657 | |nearest_unigene=Mm.271657 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=mouse | |species=mouse | ||
|start=5762358 | |start=5762358 | ||
|start_of_center_position=5762381 | |start_of_center_position=5762381 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000170116.7 ENSMUST00000053427.10 ENSMUST00000120306.7 ENSMUST00000118076.7 NM_001077661 | + | |transcript_name=ENSMUST00000170116.7 ENSMUST00000053427.10 ENSMUST00000120306.7 ENSMUST00000118076.7 NM_001361588 NM_001361589 NM_001077661 NM_001361592 AK035580 AK041953 AK037923 AK053862 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100845.1 | |tss_id=mm_100845.1 | ||
Revision as of 16:26, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5762381 |
|---|---|
| End of the center position in the TSS region: | 5762382 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000170116.7 ENSMUST00000053427.10 ENSMUST00000120306.7 ENSMUST00000118076.7 NM_001361588 NM_001361589 NM_001077661 NM_001361592 AK035580 AK041953 AK037923 AK053862 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENSMUST00000170116.7:0 ENSMUST00000053427.10:0 ENSMUST00000120306.7:0 ENSMUST00000118076.7:0 NM_001361588:0 NM_001361589:0 NM_001077661:0 NM_001361592:0 AK035580:0 AK041953:0 AK037923:0 AK053862:0 BC066994:102 AK129378:270 AK191392:390 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_001361588 |
| Entrez ID: | 72046 |
| Nearest Unigene: | Mm.271657 |
| Nearest Refseq: | NM_178623 |
| Nearest Ensembl: | ENSMUSG00000049680 |
| Gene Name: | upregulator of cell proliferation |
| Gene Alias: | 2010005J08Rik|9130001I21Rik|AW060359|Urg4|mKIAA1507 |
| Gene Description: | upregulator of cell proliferation |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
