Difference between revisions of "TSS:Mm 100846.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK083508:-117 |chr=chr11 |cpg_percent=0.08 |distance=-117 |distance_to_tss=-214 |end=5788276 |entrez_id=13169 |gc_percent=0.537313 |gene_alias=Abp1|SH3P...") |
|||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |SH3P7= | ||
|all_trans=AK083508:-117 | |all_trans=AK083508:-117 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-214 | |distance_to_tss=-214 | ||
|end=5788276 | |end=5788276 | ||
| + | |end_of_center_position=5788270 | ||
|entrez_id=13169 | |entrez_id=13169 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=Abp1 | + | |gene_alias=Abp1{{!}}SH3P7{{!}}mAbp1 |
|gene_description=drebrin-like | |gene_description=drebrin-like | ||
|gene_name=Dbnl | |gene_name=Dbnl | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |mAbp1= | ||
|nearest_ensembl=ENSMUSG00000020476 | |nearest_ensembl=ENSMUSG00000020476 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_013810 |
|nearest_refseq=NM_013810 | |nearest_refseq=NM_013810 | ||
|nearest_unigene=Mm.256925 | |nearest_unigene=Mm.256925 | ||
| Line 19: | Line 22: | ||
|species=mouse | |species=mouse | ||
|start=5788262 | |start=5788262 | ||
| + | |start_of_center_position=5788269 | ||
|strand=- | |strand=- | ||
|transcript_name=AK083508 | |transcript_name=AK083508 | ||
Latest revision as of 16:26, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5788269 |
|---|---|
| End of the center position in the TSS region: | 5788270 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK083508 |
|---|---|
| Distance: | -117 |
| Num_trans: | 1 |
| All_trans: | AK083508:-117 |
TATA-Box annotation
| Distance to TSS: | -214 |
|---|---|
| Nearest PromoterID: | NM_013810 |
| Entrez ID: | 13169 |
| Nearest Unigene: | Mm.256925 |
| Nearest Refseq: | NM_013810 |
| Nearest Ensembl: | ENSMUSG00000020476 |
| Gene Name: | Dbnl |
| Gene Alias: | Abp1|SH3P7|mAbp1 |
| Gene Description: | drebrin-like |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
