Difference between revisions of "TSS:Mm 100853.1"
From referenceTSS
| Line 2: | Line 2: | ||
|B230309I03Rik= | |B230309I03Rik= | ||
|Tdt-N= | |Tdt-N= | ||
| − | |all_trans=ENSMUST00000124564.1:-16 AJ251804:-24 AK137747:-43 ENSMUST00000109837.7:-53 AF176098:-53 ENSMUST00000153987.1:-57 BC056213:-58 AK183362:148 BC056996:-232 ENSMUST00000020767.3:-280 NM_017401 | + | |all_trans=ENSMUST00000124564.1:-16 AJ251804:-24 AK137747:-43 ENSMUST00000109837.7:-53 AF176098:-53 ENSMUST00000153987.1:-57 BC056213:-58 AK183362:148 BC056996:-232 ENSMUST00000020767.3:-280 NM_017401:-280 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 11: | Line 11: | ||
|entrez_id=54125 | |entrez_id=54125 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=AI462166 | + | |gene_alias=AI462166{{!}}B230309I03Rik{{!}}Tdt-N |
| − | |gene_description= | + | |gene_description=polymerase (DNA directed), mu |
|gene_id=54125 | |gene_id=54125 | ||
| − | |gene_name= | + | |gene_name=polymerase (DNA directed), mu |
|gene_source=MGI:1860191 | |gene_source=MGI:1860191 | ||
|gene_symbol=Polm | |gene_symbol=Polm | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_017401 | |nearest_refseq=NM_017401 | ||
|nearest_unigene=Mm.260194 | |nearest_unigene=Mm.260194 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=5837727 | |start=5837727 | ||
Revision as of 16:27, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5837731 |
|---|---|
| End of the center position in the TSS region: | 5837732 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000124564.1 |
|---|---|
| Distance: | -16 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000124564.1:-16 AJ251804:-24 AK137747:-43 ENSMUST00000109837.7:-53 AF176098:-53 ENSMUST00000153987.1:-57 BC056213:-58 AK183362:148 BC056996:-232 ENSMUST00000020767.3:-280 NM_017401:-280 |
TATA-Box annotation
| Distance to TSS: | 284 |
|---|---|
| Nearest PromoterID: | NM_017401 |
| Entrez ID: | 54125 |
| Nearest Unigene: | Mm.260194 |
| Nearest Refseq: | NM_017401 |
| Nearest Ensembl: | ENSMUSG00000020474 |
| Gene Name: | polymerase (DNA directed), mu |
| Gene Alias: | AI462166|B230309I03Rik|Tdt-N |
| Gene Description: | polymerase (DNA directed), mu |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
