Difference between revisions of "TSS:Mm 100873.1"
From referenceTSS
| Line 7: | Line 7: | ||
|Hlb62= | |Hlb62= | ||
|MODY2= | |MODY2= | ||
| − | |all_trans=ENSMUST00000102920.3:-72 NM_010292 | + | |all_trans=ENSMUST00000102920.3:-72 NM_010292:-72 M58755:-72 L38990:401 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 16: | Line 16: | ||
|entrez_id=103988 | |entrez_id=103988 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=GLK | + | |gene_alias=GLK{{!}}Gk{{!}}Gls006{{!}}HK4{{!}}HKIV{{!}}HXKP{{!}}Hlb62{{!}}MODY2 |
|gene_description=glucokinase | |gene_description=glucokinase | ||
|gene_id=103988 | |gene_id=103988 | ||
| Line 29: | Line 29: | ||
|nearest_refseq=NM_010292 | |nearest_refseq=NM_010292 | ||
|nearest_unigene=Mm.220358 | |nearest_unigene=Mm.220358 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=5949999 | |start=5949999 | ||
|start_of_center_position=5950004 | |start_of_center_position=5950004 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000102920.3 NM_010292 | + | |transcript_name=ENSMUST00000102920.3 NM_010292 M58755 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_100873.1 | |tss_id=mm_100873.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q5SVI5 |
}} | }} | ||
Revision as of 16:27, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5950004 |
|---|---|
| End of the center position in the TSS region: | 5950005 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000102920.3 NM_010292 M58755 |
|---|---|
| Distance: | -72 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000102920.3:-72 NM_010292:-72 M58755:-72 L38990:401 |
TATA-Box annotation
| Distance to TSS: | 77 |
|---|---|
| Nearest PromoterID: | NM_010292 |
| Entrez ID: | 103988 |
| Nearest Unigene: | Mm.220358 |
| Nearest Refseq: | NM_010292 |
| Nearest Ensembl: | ENSMUSG00000041798 |
| Gene Name: | glucokinase |
| Gene Alias: | GLK|Gk|Gls006|HK4|HKIV|HXKP|Hlb62|MODY2 |
| Gene Description: | glucokinase |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
