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Difference between revisions of "TSS:Mm 100886.1"

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(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.005 |distance= |distance_to_tss=36700 |end=6029052 |entrez_id=12323 |gc_percent=0.567164 |gene_alias=CaMKII |gene_description="calcium/ca...")
 
 
(One intermediate revision by the same user not shown)
Line 2: Line 2:
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.005
 
|cpg_percent=0.005
|distance=
+
|distance=NA
 
|distance_to_tss=36700
 
|distance_to_tss=36700
 
|end=6029052
 
|end=6029052
 +
|end_of_center_position=6029048
 
|entrez_id=12323
 
|entrez_id=12323
 
|gc_percent=0.567164
 
|gc_percent=0.567164
 
|gene_alias=CaMKII
 
|gene_alias=CaMKII
|gene_description="calcium/calmodulin-dependent protein kinase II, beta"
+
|gene_description=calcium/calmodulin-dependent protein kinase II, beta
 
|gene_name=Camk2b
 
|gene_name=Camk2b
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 
|nearest_ensembl=ENSMUSG00000057897
 
|nearest_ensembl=ENSMUSG00000057897
|nearest_promoter_id=NM_001174054
+
|nearest_promoter_id=NM_007595
 
|nearest_refseq=NM_007595
 
|nearest_refseq=NM_007595
 
|nearest_unigene=Mm.439733
 
|nearest_unigene=Mm.439733
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|species=mouse
 
|species=mouse
 
|start=6029043
 
|start=6029043
 +
|start_of_center_position=6029047
 
|strand=-
 
|strand=-
 
|transcript_name=
 
|transcript_name=

Latest revision as of 16:27, 19 June 2021

Basic information about the TSS


TSS ID:mm_100886.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:6029043
End:6029052
Strand:-
TSS Score:1
Start of the center position in the TSS region:6029047
End of the center position in the TSS region:6029048



Gene and protein annotation


Transcript_name:
Distance:NA
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:Camk2b
Gene_symbol:
Gene_synonyms:
Gene_source:



Transcript annotation


Transcript_name:
Distance:NA
Num_trans:0
All_trans:



TATA-Box annotation


Distance to TSS:36700
Nearest PromoterID:NM_007595
Entrez ID:12323
Nearest Unigene:Mm.439733
Nearest Refseq:NM_007595
Nearest Ensembl:ENSMUSG00000057897
Gene Name:Camk2b
Gene Alias:CaMKII
Gene Description:calcium/calmodulin-dependent protein kinase II, beta
Gene Type:protein-coding
CpG%:0.005
GC%:0.567164
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):