Difference between revisions of "TSS:Mm 100889.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000129098.1:0 AK048845:0 ENSMUST00000019133.10:26 ENSMUST00000093355.11:56 ENSMUST00000101586.2:68 AK163698:74 ENSMUST00000109815.8:75 ENSMUST00000109812.8:75 X63615:75 BC024803:75 ENSMUST00000002817.11:-79 ENSMUST00000109813.8:-85 ENSMUST00000090443.9:-85 NM_007595 | + | |all_trans=ENSMUST00000129098.1:0 AK048845:0 ENSMUST00000019133.10:26 ENSMUST00000093355.11:56 ENSMUST00000101586.2:68 AK163698:74 ENSMUST00000109815.8:75 ENSMUST00000109812.8:75 X63615:75 BC024803:75 ENSMUST00000002817.11:-79 ENSMUST00000109813.8:-85 ENSMUST00000090443.9:-85 NM_007595:-85 NM_001174053:-85 NM_001174054:-85 AK046454:-85 BC080273:88 ENSMUST00000066431.13:93 ENSMUST00000101585.9:100 ENSMUST00000154197.7:100 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.205 | |cpg_percent=0.205 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.820896 | |gc_percent=0.820896 | ||
|gene_alias=CaMKII | |gene_alias=CaMKII | ||
| − | |gene_description= | + | |gene_description=calcium/calmodulin-dependent protein kinase II, beta |
|gene_id=12323 | |gene_id=12323 | ||
| − | |gene_name= | + | |gene_name=calcium/calmodulin-dependent protein kinase II, beta |
|gene_source=MGI:88257 | |gene_source=MGI:88257 | ||
|gene_symbol=Camk2b | |gene_symbol=Camk2b | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:88257 | |hgnc_mgi_id=MGI:88257 | ||
|nearest_ensembl=ENSMUSG00000057897 | |nearest_ensembl=ENSMUSG00000057897 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_007595 |
|nearest_refseq=NM_007595 | |nearest_refseq=NM_007595 | ||
|nearest_unigene=Mm.439733 | |nearest_unigene=Mm.439733 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=mouse | |species=mouse | ||
|start=6065637 | |start=6065637 | ||
Revision as of 16:27, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6065650 |
|---|---|
| End of the center position in the TSS region: | 6065651 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000129098.1 AK048845 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENSMUST00000129098.1:0 AK048845:0 ENSMUST00000019133.10:26 ENSMUST00000093355.11:56 ENSMUST00000101586.2:68 AK163698:74 ENSMUST00000109815.8:75 ENSMUST00000109812.8:75 X63615:75 BC024803:75 ENSMUST00000002817.11:-79 ENSMUST00000109813.8:-85 ENSMUST00000090443.9:-85 NM_007595:-85 NM_001174053:-85 NM_001174054:-85 AK046454:-85 BC080273:88 ENSMUST00000066431.13:93 ENSMUST00000101585.9:100 ENSMUST00000154197.7:100 |
TATA-Box annotation
| Distance to TSS: | 98 |
|---|---|
| Nearest PromoterID: | NM_007595 |
| Entrez ID: | 12323 |
| Nearest Unigene: | Mm.439733 |
| Nearest Refseq: | NM_007595 |
| Nearest Ensembl: | ENSMUSG00000057897 |
| Gene Name: | calcium/calmodulin-dependent protein kinase II, beta |
| Gene Alias: | CaMKII |
| Gene Description: | calcium/calmodulin-dependent protein kinase II, beta |
| Gene Type: | protein-coding |
| CpG%: | 0.205 |
| GC%: | 0.820896 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
