Difference between revisions of "TSS:Mm 100907.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=7984 | |distance_to_tss=7984 | ||
|end=6222283 | |end=6222283 | ||
| Line 9: | Line 9: | ||
|entrez_id=237636 | |entrez_id=237636 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=9130221N23Rik | + | |gene_alias=9130221N23Rik{{!}}Gm243 |
| − | |gene_description=NPC1 | + | |gene_description=NPC1 like intracellular cholesterol transporter 1 |
|gene_name=Npc1l1 | |gene_name=Npc1l1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 22: | Line 22: | ||
|start_of_center_position=6222261 | |start_of_center_position=6222261 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=7(GCTTTTCAAGCC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:28, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6222261 |
|---|---|
| End of the center position in the TSS region: | 6222262 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 7984 |
|---|---|
| Nearest PromoterID: | NM_207242 |
| Entrez ID: | 237636 |
| Nearest Unigene: | Mm.212492 |
| Nearest Refseq: | NM_207242 |
| Nearest Ensembl: | ENSMUSG00000020447 |
| Gene Name: | Npc1l1 |
| Gene Alias: | 9130221N23Rik|Gm243 |
| Gene Description: | NPC1 like intracellular cholesterol transporter 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 7(GCTTTTCAAGCC,+,0.00) |
