Difference between revisions of "TSS:Mm 100911.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Gm243= | |Gm243= | ||
| − | |all_trans=ENSMUST00000004505.2:0 AK078947:0 AY437866:5 BC131789:5 BC131788:6 NM_207242 | + | |all_trans=ENSMUST00000004505.2:0 AK078947:0 AY437866:5 BC131789:5 BC131788:6 NM_207242:-85 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 10: | Line 10: | ||
|entrez_id=237636 | |entrez_id=237636 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=9130221N23Rik | + | |gene_alias=9130221N23Rik{{!}}Gm243 |
| − | |gene_description=NPC1 | + | |gene_description=NPC1 like intracellular cholesterol transporter 1 |
|gene_id=237636 | |gene_id=237636 | ||
| − | |gene_name=NPC1 | + | |gene_name=NPC1 like intracellular cholesterol transporter 1 |
|gene_source=MGI:2685089 | |gene_source=MGI:2685089 | ||
|gene_symbol=Npc1l1 | |gene_symbol=Npc1l1 | ||
| − | |gene_synonyms= | + | |gene_synonyms=9130221N23Rik Niemann-Pick_disease,_type_C1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2685089 | |hgnc_mgi_id=MGI:2685089 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_207242 | |nearest_refseq=NM_207242 | ||
|nearest_unigene=Mm.212492 | |nearest_unigene=Mm.212492 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=mouse | |species=mouse | ||
|start=6230127 | |start=6230127 | ||
Revision as of 16:28, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6230143 |
|---|---|
| End of the center position in the TSS region: | 6230144 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000004505.2 AK078947 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000004505.2:0 AK078947:0 AY437866:5 BC131789:5 BC131788:6 NM_207242:-85 |
TATA-Box annotation
| Distance to TSS: | 101 |
|---|---|
| Nearest PromoterID: | NM_207242 |
| Entrez ID: | 237636 |
| Nearest Unigene: | Mm.212492 |
| Nearest Refseq: | NM_207242 |
| Nearest Ensembl: | ENSMUSG00000020447 |
| Gene Name: | NPC1 like intracellular cholesterol transporter 1 |
| Gene Alias: | 9130221N23Rik|Gm243 |
| Gene Description: | NPC1 like intracellular cholesterol transporter 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
