Difference between revisions of "TSS:Mm 100934.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000144725.7:-46 BC113755:-51 BC113954:-51 AK042033:-55 AK146251:-78 AK171505:-79 AK159700:-82 AK036461:-89 AK171284:-99 AK152797:-100 AK169450:-100 ENSMUST00000003459.3:-107 ENSMUST00000156878.7:-107 NM_178440 | + | |all_trans=ENSMUST00000144725.7:-46 BC113755:-51 BC113954:-51 AK042033:-55 AK146251:-78 AK171505:-79 AK159700:-82 AK036461:-89 AK171284:-99 AK152797:-100 AK169450:-100 ENSMUST00000003459.3:-107 ENSMUST00000156878.7:-107 NM_178440:-107 AK088011:-107 AK030825:-107 ENSMUST00000146536.1:-114 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_178440 | |nearest_refseq=NM_178440 | ||
|nearest_unigene=Mm.239554 | |nearest_unigene=Mm.239554 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=mouse | |species=mouse | ||
|start=6520844 | |start=6520844 | ||
Revision as of 16:28, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6520847 |
|---|---|
| End of the center position in the TSS region: | 6520848 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000144725.7 |
|---|---|
| Distance: | -46 |
| Num_trans: | 17 |
| All_trans: | ENSMUST00000144725.7:-46 BC113755:-51 BC113954:-51 AK042033:-55 AK146251:-78 AK171505:-79 AK159700:-82 AK036461:-89 AK171284:-99 AK152797:-100 AK169450:-100 ENSMUST00000003459.3:-107 ENSMUST00000156878.7:-107 NM_178440:-107 AK088011:-107 AK030825:-107 ENSMUST00000146536.1:-114 |
TATA-Box annotation
| Distance to TSS: | 110 |
|---|---|
| Nearest PromoterID: | NM_178440 |
| Entrez ID: | 246177 |
| Nearest Unigene: | Mm.239554 |
| Nearest Refseq: | NM_178440 |
| Nearest Ensembl: | ENSMUSG00000020437 |
| Gene Name: | myosin IG |
| Gene Alias: | E430002D17Rik |
| Gene Description: | myosin IG |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
