Difference between revisions of "TSS:Mm 100936.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000144725.7:-6 BC113755:-11 BC113954:-11 AK042033:-15 AK146251:-38 AK171505:-39 AK159700:-42 AK036461:-49 AK171284:-59 AK152797:-60 AK169450:-60 ENSMUST00000003459.3:-67 ENSMUST00000156878.7:-67 NM_178440 | + | |all_trans=ENSMUST00000144725.7:-6 BC113755:-11 BC113954:-11 AK042033:-15 AK146251:-38 AK171505:-39 AK159700:-42 AK036461:-49 AK171284:-59 AK152797:-60 AK169450:-60 ENSMUST00000003459.3:-67 ENSMUST00000156878.7:-67 NM_178440:-67 AK088011:-67 AK030825:-67 ENSMUST00000146536.1:-74 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_178440 | |nearest_refseq=NM_178440 | ||
|nearest_unigene=Mm.239554 | |nearest_unigene=Mm.239554 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=mouse | |species=mouse | ||
|start=6520872 | |start=6520872 | ||
Revision as of 16:28, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6520881 |
|---|---|
| End of the center position in the TSS region: | 6520882 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000144725.7 |
|---|---|
| Distance: | -6 |
| Num_trans: | 17 |
| All_trans: | ENSMUST00000144725.7:-6 BC113755:-11 BC113954:-11 AK042033:-15 AK146251:-38 AK171505:-39 AK159700:-42 AK036461:-49 AK171284:-59 AK152797:-60 AK169450:-60 ENSMUST00000003459.3:-67 ENSMUST00000156878.7:-67 NM_178440:-67 AK088011:-67 AK030825:-67 ENSMUST00000146536.1:-74 |
TATA-Box annotation
| Distance to TSS: | 76 |
|---|---|
| Nearest PromoterID: | NM_178440 |
| Entrez ID: | 246177 |
| Nearest Unigene: | Mm.239554 |
| Nearest Refseq: | NM_178440 |
| Nearest Ensembl: | ENSMUSG00000020437 |
| Gene Name: | myosin IG |
| Gene Alias: | E430002D17Rik |
| Gene Description: | myosin IG |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
