Difference between revisions of "TSS:Mm 100967.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|OTTMUSG00000005127= | |OTTMUSG00000005127= | ||
| − | |all_trans=ENSMUST00000127510.8:0 NR_028586 | + | |all_trans=ENSMUST00000127510.8:0 NR_028586:0 AK132798:0 ENSMUST00000142928.1:22 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 10: | Line 10: | ||
|entrez_id=100041311 | |entrez_id=100041311 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 11978 | |gene_description=predicted gene 11978 | ||
|gene_id=100041311 | |gene_id=100041311 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NR_028586 | |nearest_refseq=NR_028586 | ||
|nearest_unigene=Mm.388018 | |nearest_unigene=Mm.388018 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=6660231 | |start=6660231 | ||
|start_of_center_position=6660235 | |start_of_center_position=6660235 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000127510.8 NR_028586 | + | |transcript_name=ENSMUST00000127510.8 NR_028586 AK132798 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100967.1 | |tss_id=mm_100967.1 | ||
Revision as of 16:29, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 6660235 |
|---|---|
| End of the center position in the TSS region: | 6660236 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000127510.8 NR_028586 AK132798 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000127510.8:0 NR_028586:0 AK132798:0 ENSMUST00000142928.1:22 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NR_028586 |
| Entrez ID: | 100041311 |
| Nearest Unigene: | Mm.388018 |
| Nearest Refseq: | NR_028586 |
| Nearest Ensembl: | ENSMUSG00000086373 |
| Gene Name: | predicted gene 11978 |
| Gene Alias: | - |
| Gene Description: | predicted gene 11978 |
| Gene Type: | pseudo |
| CpG%: | 0.015 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
