Difference between revisions of "TSS:Mm 100986.1"
From referenceTSS
| Line 2: | Line 2: | ||
|IGFBP-3= | |IGFBP-3= | ||
|IGgfbp3= | |IGgfbp3= | ||
| − | |all_trans=X81581:20 ENSMUST00000020702.10:-38 BC031421:-38 BC058261:-47 ENSMUST00000135887.2:-64 NM_008343:-64 | + | |all_trans=X81581:20 ENSMUST00000020702.10:-38 BC031421:-38 BC058261:-47 ENSMUST00000135887.2:-64 NM_008343:-64 LF204676:-64 MA440253:-64 LF198377:-65 MA433954:-65 AK141690:306 AK077477:387 AK045003:467 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| Line 11: | Line 11: | ||
|entrez_id=16009 | |entrez_id=16009 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=AI649005 | + | |gene_alias=AI649005{{!}}IGFBP-3{{!}}IGgfbp3 |
|gene_description=insulin-like growth factor binding protein 3 | |gene_description=insulin-like growth factor binding protein 3 | ||
|gene_id=16009 | |gene_id=16009 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_008343 | |nearest_refseq=NM_008343 | ||
|nearest_unigene=Mm.29254 | |nearest_unigene=Mm.29254 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=mouse | |species=mouse | ||
|start=7213850 | |start=7213850 | ||
Revision as of 16:30, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 7213854 |
|---|---|
| End of the center position in the TSS region: | 7213855 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | X81581 |
|---|---|
| Distance: | 20 |
| Num_trans: | 13 |
| All_trans: | X81581:20 ENSMUST00000020702.10:-38 BC031421:-38 BC058261:-47 ENSMUST00000135887.2:-64 NM_008343:-64 LF204676:-64 MA440253:-64 LF198377:-65 MA433954:-65 AK141690:306 AK077477:387 AK045003:467 |
TATA-Box annotation
| Distance to TSS: | 68 |
|---|---|
| Nearest PromoterID: | NM_008343 |
| Entrez ID: | 16009 |
| Nearest Unigene: | Mm.29254 |
| Nearest Refseq: | NM_008343 |
| Nearest Ensembl: | ENSMUSG00000020427 |
| Gene Name: | insulin-like growth factor binding protein 3 |
| Gene Alias: | AI649005|IGFBP-3|IGgfbp3 |
| Gene Description: | insulin-like growth factor binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
