Difference between revisions of "TSS:Mm 101054.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK163756:14 ENSMUST00000020695.12:19 NM_001083587:19 uc007hzk.1:19 AK089717:26 AK052680:26 |chr=chr11 |cpg_percent=0.145 |distance=14 |distance_to_tss=-...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK163756:14 ENSMUST00000020695.12:19 NM_001083587 | + | |F830010I22Rik= |
| + | |TEM6= | ||
| + | |Tens1= | ||
| + | |all_trans=AK163756:14 ENSMUST00000020695.12:19 NM_001083587:19 AK089717:26 AK052680:26 ENSMUST00000239111.1:-87 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-39 | |distance_to_tss=-39 | ||
|end=8664594 | |end=8664594 | ||
| + | |end_of_center_position=8664574 | ||
|entrez_id=319939 | |entrez_id=319939 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=BC023928 | + | |gene_alias=BC023928{{!}}F830010I22Rik{{!}}TEM6{{!}}Tens1 |
|gene_description=tensin 3 | |gene_description=tensin 3 | ||
|gene_name=Tns3 | |gene_name=Tns3 | ||
| Line 19: | Line 23: | ||
|species=mouse | |species=mouse | ||
|start=8664553 | |start=8664553 | ||
| + | |start_of_center_position=8664573 | ||
|strand=- | |strand=- | ||
|transcript_name=AK163756 | |transcript_name=AK163756 | ||
Latest revision as of 16:31, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 8664573 |
|---|---|
| End of the center position in the TSS region: | 8664574 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK163756 |
|---|---|
| Distance: | 14 |
| Num_trans: | 6 |
| All_trans: | AK163756:14 ENSMUST00000020695.12:19 NM_001083587:19 AK089717:26 AK052680:26 ENSMUST00000239111.1:-87 |
TATA-Box annotation
| Distance to TSS: | -39 |
|---|---|
| Nearest PromoterID: | NM_001083587 |
| Entrez ID: | 319939 |
| Nearest Unigene: | Mm.337820 |
| Nearest Refseq: | NM_001083587 |
| Nearest Ensembl: | ENSMUSG00000020422 |
| Gene Name: | Tns3 |
| Gene Alias: | BC023928|F830010I22Rik|TEM6|Tens1 |
| Gene Description: | tensin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
