Difference between revisions of "TSS:Mm 101055.1"
From referenceTSS
| Line 3: | Line 3: | ||
|TEM6= | |TEM6= | ||
|Tens1= | |Tens1= | ||
| − | |all_trans=AK163756:128 ENSMUST00000020695.12:133 NM_001083587 | + | |all_trans=ENSMUST00000239111.1:0 AK163756:128 ENSMUST00000020695.12:133 NM_001083587:133 AK089717:140 AK052680:140 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-139 | |distance_to_tss=-139 | ||
|end=8664681 | |end=8664681 | ||
| Line 12: | Line 12: | ||
|entrez_id=319939 | |entrez_id=319939 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=BC023928 | + | |gene_alias=BC023928{{!}}F830010I22Rik{{!}}TEM6{{!}}Tens1 |
|gene_description=tensin 3 | |gene_description=tensin 3 | ||
| − | |gene_name=Tns3 | + | |gene_id=319939 |
| + | |gene_name=tensin 3 | ||
| + | |gene_source=MGI:2443012 | ||
| + | |gene_symbol=Tns3 | ||
| + | |gene_synonyms=F830010I22Rik TEM6 Tens1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=MGI:2443012 | ||
|nearest_ensembl=ENSMUSG00000020422 | |nearest_ensembl=ENSMUSG00000020422 | ||
|nearest_promoter_id=NM_001083587 | |nearest_promoter_id=NM_001083587 | ||
| Line 25: | Line 30: | ||
|start_of_center_position=8664674 | |start_of_center_position=8664674 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENSMUST00000239111.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101055.1 | |tss_id=mm_101055.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=A0A5F8MPF2 | ||
}} | }} | ||
Revision as of 16:31, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 8664674 |
|---|---|
| End of the center position in the TSS region: | 8664675 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000239111.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENSMUST00000239111.1:0 AK163756:128 ENSMUST00000020695.12:133 NM_001083587:133 AK089717:140 AK052680:140 |
TATA-Box annotation
| Distance to TSS: | -139 |
|---|---|
| Nearest PromoterID: | NM_001083587 |
| Entrez ID: | 319939 |
| Nearest Unigene: | Mm.337820 |
| Nearest Refseq: | NM_001083587 |
| Nearest Ensembl: | ENSMUSG00000020422 |
| Gene Name: | tensin 3 |
| Gene Alias: | BC023928|F830010I22Rik|TEM6|Tens1 |
| Gene Description: | tensin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
