Difference between revisions of "TSS:Mm 101059.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000043377.5:0 NM_001290519 | + | |all_trans=ENSMUST00000043377.5:0 NM_001290519:0 AK132922:0 HQ141857:5 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_177576 | |nearest_refseq=NM_177576 | ||
|nearest_unigene=Mm.79210 | |nearest_unigene=Mm.79210 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=9039585 | |start=9039585 | ||
|start_of_center_position=9039593 | |start_of_center_position=9039593 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000043377.5 NM_001290519 | + | |transcript_name=ENSMUST00000043377.5 NM_001290519 AK132922 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101059.1 | |tss_id=mm_101059.1 | ||
Revision as of 16:31, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 9039593 |
|---|---|
| End of the center position in the TSS region: | 9039594 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000043377.5 NM_001290519 AK132922 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000043377.5:0 NM_001290519:0 AK132922:0 HQ141857:5 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NM_001290519 |
| Entrez ID: | 194974 |
| Nearest Unigene: | Mm.79210 |
| Nearest Refseq: | NM_177576 |
| Nearest Ensembl: | ENSMUSG00000040985 |
| Gene Name: | Sad1 and UNC84 domain containing 3 |
| Gene Alias: | Sunc1 |
| Gene Description: | Sad1 and UNC84 domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
