Difference between revisions of "TSS:Mm 101062.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC109334:-394 ENSMUST00000102909.7:-480 NM_001290520:-480 NM_177576 | + | |all_trans=BC109334:-394 ENSMUST00000102909.7:-480 NM_001290520:-480 NM_177576:-480 AK052771:-480 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 9: | Line 9: | ||
|entrez_id=626870 | |entrez_id=626870 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 11992 | |gene_description=predicted gene 11992 | ||
|gene_id=194974 | |gene_id=194974 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001037928 | |nearest_refseq=NM_001037928 | ||
|nearest_unigene=Mm.369429 | |nearest_unigene=Mm.369429 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=9048493 | |start=9048493 | ||
Revision as of 16:31, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 9048502 |
|---|---|
| End of the center position in the TSS region: | 9048503 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC109334 |
|---|---|
| Distance: | -394 |
| Num_trans: | 5 |
| All_trans: | BC109334:-394 ENSMUST00000102909.7:-480 NM_001290520:-480 NM_177576:-480 AK052771:-480 |
TATA-Box annotation
| Distance to TSS: | -90 |
|---|---|
| Nearest PromoterID: | NM_001037928 |
| Entrez ID: | 626870 |
| Nearest Unigene: | Mm.369429 |
| Nearest Refseq: | NM_001037928 |
| Nearest Ensembl: | ENSMUSG00000040978 |
| Gene Name: | Sad1 and UNC84 domain containing 3 |
| Gene Alias: | - |
| Gene Description: | predicted gene 11992 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
