Personal tools

Difference between revisions of "TSS:Mm 101073.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.01 |distance= |distance_to_tss=62525 |end=11565315 |entrez_id=102631730 |gc_percent=0.537313 |gene_alias=- |gene_description=RIKEN cDNA 4...")
 
 
(One intermediate revision by the same user not shown)
Line 2: Line 2:
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.01
 
|cpg_percent=0.01
|distance=
+
|distance=NA
 
|distance_to_tss=62525
 
|distance_to_tss=62525
 
|end=11565315
 
|end=11565315
 +
|end_of_center_position=11565313
 
|entrez_id=102631730
 
|entrez_id=102631730
 
|gc_percent=0.537313
 
|gc_percent=0.537313
Line 18: Line 19:
 
|species=mouse
 
|species=mouse
 
|start=11565310
 
|start=11565310
 +
|start_of_center_position=11565312
 
|strand=-
 
|strand=-
|tata_box="-32(CTTTATATACCA,+,0.00)"
+
|tata_box=-32(CTTTATATACCA,+,0.00)
 
|transcript_name=
 
|transcript_name=
 
|tss_classification=no
 
|tss_classification=no

Latest revision as of 16:32, 19 June 2021

Basic information about the TSS


TSS ID:mm_101073.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:11565310
End:11565315
Strand:-
TSS Score:1
Start of the center position in the TSS region:11565312
End of the center position in the TSS region:11565313



Gene and protein annotation


Transcript_name:
Distance:NA
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:4930512M02Rik
Gene_symbol:
Gene_synonyms:
Gene_source:



Transcript annotation


Transcript_name:
Distance:NA
Num_trans:0
All_trans:



TATA-Box annotation


Distance to TSS:62525
Nearest PromoterID:NM_001305143
Entrez ID:102631730
Nearest Unigene:Mm.159430
Nearest Refseq:NM_001305143
Nearest Ensembl:ENSMUSG00000062511
Gene Name:4930512M02Rik
Gene Alias:-
Gene Description:RIKEN cDNA 4930512M02 gene
Gene Type:protein-coding
CpG%:0.01
GC%:0.537313
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-32(CTTTATATACCA,+,0.00)