Difference between revisions of "TSS:Mm 101096.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000146359.7:0 ENSMUST00000134121.1:0 AK149141:0 AK011834:0 AK160769:0 ENSMUST00000109659.8:-1 NM_016672 | + | |all_trans=ENSMUST00000146359.7:0 ENSMUST00000134121.1:0 AK149141:0 AK011834:0 AK160769:0 ENSMUST00000109659.8:-1 NM_016672:-1 ENSMUST00000155690.1:26 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_016672 | |nearest_refseq=NM_016672 | ||
|nearest_unigene=Mm.12906 | |nearest_unigene=Mm.12906 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=11890394 | |start=11890394 | ||
| Line 31: | Line 31: | ||
|tss_id=mm_101096.1 | |tss_id=mm_101096.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q3TUH2 | + | |uniprot_id=Q3TUH2 Q5SUV8 |
}} | }} | ||
Revision as of 16:32, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 11890400 |
|---|---|
| End of the center position in the TSS region: | 11890401 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000146359.7 ENSMUST00000134121.1 AK149141 AK011834 AK160769 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000146359.7:0 ENSMUST00000134121.1:0 AK149141:0 AK011834:0 AK160769:0 ENSMUST00000109659.8:-1 NM_016672:-1 ENSMUST00000155690.1:26 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_016672 |
| Entrez ID: | 13195 |
| Nearest Unigene: | Mm.12906 |
| Nearest Refseq: | NM_016672 |
| Nearest Ensembl: | ENSMUSG00000020182 |
| Gene Name: | dopa decarboxylase |
| Gene Alias: | Aadc |
| Gene Description: | dopa decarboxylase |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
