Difference between revisions of "TSS:Mm 101135.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000109650.7:0 ENSMUST00000172919.7:47 AK028833:47 ENSMUST00000172956.7:51 AY308745:51 BC145116:51 BC145118:51 BC150706:51 AK147366:-77 AK147633:-77 ENSMUST00000046755.13:-78 ENSMUST00000109651.8 | + | |all_trans=ENSMUST00000109650.7:0 ENSMUST00000172919.7:47 AK028833:47 ENSMUST00000172956.7:51 AY308745:51 BC145116:51 BC145118:51 BC150706:51 AK147366:-77 AK147633:-77 ENSMUST00000046755.13:-78 ENSMUST00000109651.8:-81 NM_001282993:-81 NM_172496:-81 LF198383:-82 MA433960:-82 ENSMUST00000130572.1:99 AK049730:99 LF226353:409 MA461930:409 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_172496 | |nearest_refseq=NM_172496 | ||
|nearest_unigene=Mm.22847 | |nearest_unigene=Mm.22847 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=mouse | |species=mouse | ||
|start=12464850 | |start=12464850 | ||
Revision as of 16:33, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 12464864 |
|---|---|
| End of the center position in the TSS region: | 12464865 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000109650.7 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENSMUST00000109650.7:0 ENSMUST00000172919.7:47 AK028833:47 ENSMUST00000172956.7:51 AY308745:51 BC145116:51 BC145118:51 BC150706:51 AK147366:-77 AK147633:-77 ENSMUST00000046755.13:-78 ENSMUST00000109651.8:-81 NM_001282993:-81 NM_172496:-81 LF198383:-82 MA433960:-82 ENSMUST00000130572.1:99 AK049730:99 LF226353:409 MA461930:409 |
TATA-Box annotation
| Distance to TSS: | 95 |
|---|---|
| Nearest PromoterID: | NM_172496 |
| Entrez ID: | 12808 |
| Nearest Unigene: | Mm.22847 |
| Nearest Refseq: | NM_172496 |
| Nearest Ensembl: | ENSMUSG00000020173 |
| Gene Name: | cordon-bleu WH2 repeat |
| Gene Alias: | - |
| Gene Description: | cordon-bleu WH2 repeat |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
