Difference between revisions of "TSS:Mm 101184.1"
From referenceTSS
| Line 6: | Line 6: | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-7523 |
|end=17044337 | |end=17044337 | ||
|end_of_center_position=17044336 | |end_of_center_position=17044336 | ||
|entrez_id=380686 | |entrez_id=380686 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
| − | |gene_alias=1500041B16Rik | + | |gene_alias=1500041B16Rik{{!}}3110054C06Rik{{!}}5330437A18Rik{{!}}AI854501{{!}}C2orf32 |
|gene_description=cannabinoid receptor interacting protein 1 | |gene_description=cannabinoid receptor interacting protein 1 | ||
|gene_name=Cnrip1 | |gene_name=Cnrip1 | ||
| Line 25: | Line 25: | ||
|start_of_center_position=17044335 | |start_of_center_position=17044335 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-33(ATGCTTAAAAGG,-,0.00),-31(GCTTAAAAGGAC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:34, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 17044335 |
|---|---|
| End of the center position in the TSS region: | 17044336 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -7523 |
|---|---|
| Nearest PromoterID: | NM_029861 |
| Entrez ID: | 380686 |
| Nearest Unigene: | Mm.425666 |
| Nearest Refseq: | NM_029861 |
| Nearest Ensembl: | ENSMUSG00000044629 |
| Gene Name: | Cnrip1 |
| Gene Alias: | 1500041B16Rik|3110054C06Rik|5330437A18Rik|AI854501|C2orf32 |
| Gene Description: | cannabinoid receptor interacting protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(ATGCTTAAAAGG,-,0.00),-31(GCTTAAAAGGAC,+,0.00) |
