Difference between revisions of "TSS:Mm 101185.1"
From referenceTSS
| Line 4: | Line 4: | ||
|AI854501= | |AI854501= | ||
|C2orf32= | |C2orf32= | ||
| − | |all_trans=ENSMUST00000020321.12 | + | |all_trans=ENSMUST00000020321.12:-18 AK038804:-18 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=-18 | |distance=-18 | ||
| − | |distance_to_tss= | + | |distance_to_tss=495 |
|end=17052363 | |end=17052363 | ||
|end_of_center_position=17052354 | |end_of_center_position=17052354 | ||
|entrez_id=380686 | |entrez_id=380686 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=1500041B16Rik | + | |gene_alias=1500041B16Rik{{!}}3110054C06Rik{{!}}5330437A18Rik{{!}}AI854501{{!}}C2orf32 |
|gene_description=cannabinoid receptor interacting protein 1 | |gene_description=cannabinoid receptor interacting protein 1 | ||
|gene_id=56193 | |gene_id=56193 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_029861 | |nearest_refseq=NM_029861 | ||
|nearest_unigene=Mm.425666 | |nearest_unigene=Mm.425666 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=mouse | |species=mouse | ||
|start=17052344 | |start=17052344 | ||
|start_of_center_position=17052353 | |start_of_center_position=17052353 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000020321.12 | + | |transcript_name=ENSMUST00000020321.12 AK038804 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101185.1 | |tss_id=mm_101185.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q8CAG6 | + | |uniprot_id=Q8CAG6 |
}} | }} | ||
Revision as of 16:34, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17052353 |
|---|---|
| End of the center position in the TSS region: | 17052354 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000020321.12 AK038804 |
|---|---|
| Distance: | -18 |
| Num_trans: | 2 |
| All_trans: | ENSMUST00000020321.12:-18 AK038804:-18 |
TATA-Box annotation
| Distance to TSS: | 495 |
|---|---|
| Nearest PromoterID: | NM_029861 |
| Entrez ID: | 380686 |
| Nearest Unigene: | Mm.425666 |
| Nearest Refseq: | NM_029861 |
| Nearest Ensembl: | ENSMUSG00000044629 |
| Gene Name: | pleckstrin |
| Gene Alias: | 1500041B16Rik|3110054C06Rik|5330437A18Rik|AI854501|C2orf32 |
| Gene Description: | cannabinoid receptor interacting protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
