Difference between revisions of "TSS:Mm 101190.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|AA672646= | |AA672646= | ||
| − | |all_trans=ENSMUST00000076661.6:0 NM_026576:0 | + | |all_trans=ENSMUST00000076661.6:0 NM_026576:0 NM_001362970:0 AK034138:0 AK019965:0 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 10: | Line 10: | ||
|entrez_id=68145 | |entrez_id=68145 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=5730466H23Rik | + | |gene_alias=5730466H23Rik{{!}}AA672646 |
|gene_description=Ewing tumor-associated antigen 1 | |gene_description=Ewing tumor-associated antigen 1 | ||
|gene_id=68145 | |gene_id=68145 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_026576 | |nearest_refseq=NM_026576 | ||
|nearest_unigene=Mm.178684 | |nearest_unigene=Mm.178684 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=17953861 | |start=17953861 | ||
|start_of_center_position=17953879 | |start_of_center_position=17953879 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000076661.6 NM_026576 | + | |transcript_name=ENSMUST00000076661.6 NM_026576 NM_001362970 AK034138 AK019965 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101190.1 | |tss_id=mm_101190.1 | ||
Revision as of 16:34, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17953879 |
|---|---|
| End of the center position in the TSS region: | 17953880 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000076661.6 NM_026576 NM_001362970 AK034138 AK019965 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENSMUST00000076661.6:0 NM_026576:0 NM_001362970:0 AK034138:0 AK019965:0 |
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NM_026576 |
| Entrez ID: | 68145 |
| Nearest Unigene: | Mm.178684 |
| Nearest Refseq: | NM_026576 |
| Nearest Ensembl: | ENSMUSG00000016984 |
| Gene Name: | Ewing tumor-associated antigen 1 |
| Gene Alias: | 5730466H23Rik|AA672646 |
| Gene Description: | Ewing tumor-associated antigen 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
