Difference between revisions of "TSS:Mm 101199.1"
From referenceTSS
| Line 10: | Line 10: | ||
|entrez_id=17268 | |entrez_id=17268 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=C530044H18Rik | + | |gene_alias=C530044H18Rik{{!}}Evi8 |
|gene_description=Meis homeobox 1 | |gene_description=Meis homeobox 1 | ||
|gene_id=17268 | |gene_id=17268 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=19018415 | |start_of_center_position=19018415 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-33(GCTTTTATGCTC,+,0.00) |
|transcript_name=AB221660 | |transcript_name=AB221660 | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 16:35, 19 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 19018415 |
|---|---|
| End of the center position in the TSS region: | 19018416 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB221660 |
|---|---|
| Distance: | 172 |
| Num_trans: | 10 |
| All_trans: | AB221660:172 U33629:-238 U33630:-238 ENSMUST00000102878.10:-286 ENSMUST00000177417.7:-286 AK132298:-321 ENSMUST00000125722.7:-494 ENSMUST00000137300.1:-494 AK049720:-494 AK032947:-494 |
TATA-Box annotation
| Distance to TSS: | 553 |
|---|---|
| Nearest PromoterID: | NM_001193271 |
| Entrez ID: | 17268 |
| Nearest Unigene: | Mm.356578 |
| Nearest Refseq: | NM_010789 |
| Nearest Ensembl: | ENSMUSG00000020160 |
| Gene Name: | Meis homeobox 1 |
| Gene Alias: | C530044H18Rik|Evi8 |
| Gene Description: | Meis homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(GCTTTTATGCTC,+,0.00) |
