Difference between revisions of "TSS:Mm 101212.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC023864:-53 |chr=chr11 |cpg_percent=0.025 |distance=-53 |distance_to_tss=35709 |end=20077250 |entrez_id=66713 |gc_percent=0.442786 |gene_alias=4921510D...") |
|||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC023864:-53 | + | |AA409782= |
| + | |Arp2= | ||
| + | |D6Ertd746e= | ||
| + | |all_trans=LF226389:3 MA461966:3 BC023864:-53 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=3 |
|distance_to_tss=35709 | |distance_to_tss=35709 | ||
|end=20077250 | |end=20077250 | ||
| + | |end_of_center_position=20077243 | ||
|entrez_id=66713 | |entrez_id=66713 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=4921510D23Rik | + | |gene_alias=4921510D23Rik{{!}}AA409782{{!}}Arp2{{!}}D6Ertd746e |
|gene_description=ARP2 actin-related protein 2 | |gene_description=ARP2 actin-related protein 2 | ||
|gene_id=66713 | |gene_id=66713 | ||
| − | |gene_name= | + | |gene_name=Actr2 |
|gene_source=MGI:1913963 | |gene_source=MGI:1913963 | ||
|gene_symbol=Actr2 | |gene_symbol=Actr2 | ||
| Line 18: | Line 22: | ||
|hgnc_mgi_id=MGI:1913963 | |hgnc_mgi_id=MGI:1913963 | ||
|nearest_ensembl=ENSMUSG00000020152 | |nearest_ensembl=ENSMUSG00000020152 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001362899 |
|nearest_refseq=NM_146243 | |nearest_refseq=NM_146243 | ||
|nearest_unigene=Mm.259045 | |nearest_unigene=Mm.259045 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=20077234 | |start=20077234 | ||
| + | |start_of_center_position=20077242 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF226389 MA461966 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_101212.1 | |tss_id=mm_101212.1 | ||
Latest revision as of 16:35, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 20077242 |
|---|---|
| End of the center position in the TSS region: | 20077243 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF226389 MA461966 |
|---|---|
| Distance: | 3 |
| Num_trans: | 3 |
| All_trans: | LF226389:3 MA461966:3 BC023864:-53 |
TATA-Box annotation
| Distance to TSS: | 35709 |
|---|---|
| Nearest PromoterID: | NM_001362899 |
| Entrez ID: | 66713 |
| Nearest Unigene: | Mm.259045 |
| Nearest Refseq: | NM_146243 |
| Nearest Ensembl: | ENSMUSG00000020152 |
| Gene Name: | Actr2 |
| Gene Alias: | 4921510D23Rik|AA409782|Arp2|D6Ertd746e |
| Gene Description: | ARP2 actin-related protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
