Difference between revisions of "TSS:Mm 101214.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |AA409782= | ||
| + | |Arp2= | ||
| + | |D6Ertd746e= | ||
|all_trans=AK086331:312 | |all_trans=AK086331:312 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=28967 | |distance_to_tss=28967 | ||
|end=20084008 | |end=20084008 | ||
| + | |end_of_center_position=20083984 | ||
|entrez_id=66713 | |entrez_id=66713 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=4921510D23Rik | + | |gene_alias=4921510D23Rik{{!}}AA409782{{!}}Arp2{{!}}D6Ertd746e |
|gene_description=ARP2 actin-related protein 2 | |gene_description=ARP2 actin-related protein 2 | ||
|gene_name=Actr2 | |gene_name=Actr2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSMUSG00000020152 | |nearest_ensembl=ENSMUSG00000020152 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001362899 |
|nearest_refseq=NM_146243 | |nearest_refseq=NM_146243 | ||
|nearest_unigene=Mm.259045 | |nearest_unigene=Mm.259045 | ||
| Line 19: | Line 23: | ||
|species=mouse | |species=mouse | ||
|start=20083959 | |start=20083959 | ||
| + | |start_of_center_position=20083983 | ||
|strand=- | |strand=- | ||
|transcript_name=AK086331 | |transcript_name=AK086331 | ||
Latest revision as of 16:35, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 20083983 |
|---|---|
| End of the center position in the TSS region: | 20083984 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK086331 |
|---|---|
| Distance: | 312 |
| Num_trans: | 1 |
| All_trans: | AK086331:312 |
TATA-Box annotation
| Distance to TSS: | 28967 |
|---|---|
| Nearest PromoterID: | NM_001362899 |
| Entrez ID: | 66713 |
| Nearest Unigene: | Mm.259045 |
| Nearest Refseq: | NM_146243 |
| Nearest Ensembl: | ENSMUSG00000020152 |
| Gene Name: | Actr2 |
| Gene Alias: | 4921510D23Rik|AA409782|Arp2|D6Ertd746e |
| Gene Description: | ARP2 actin-related protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
