Difference between revisions of "TSS:Mm 101253.1"
From referenceTSS
Line 4: | Line 4: | ||
|Hspc159= | |Hspc159= | ||
|Lgalsla= | |Lgalsla= | ||
− | |all_trans=BC019131:4 ENSMUST00000047028.8:5 ENSMUST00000154300.7:5 AK167557:21 NM_173752 | + | |all_trans=BC019131:4 ENSMUST00000047028.8:5 ENSMUST00000154300.7:5 AK167557:21 NM_173752:-34 ENSMUST00000132928.1:39 AK041053:39 AK156350:-162 ENSMUST00000144441.7:306 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
Line 13: | Line 13: | ||
|entrez_id=216551 | |entrez_id=216551 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
− | |gene_alias=1110067D22Rik | + | |gene_alias=1110067D22Rik{{!}}A530071M23{{!}}Grpa{{!}}Hspc159{{!}}Lgalsla |
− | |gene_description= | + | |gene_description=lectin, galactoside binding-like |
|gene_id=216551 | |gene_id=216551 | ||
− | |gene_name= | + | |gene_name=lectin, galactoside binding-like |
|gene_source=MGI:1916114 | |gene_source=MGI:1916114 | ||
|gene_symbol=Lgalsl | |gene_symbol=Lgalsl | ||
Line 26: | Line 26: | ||
|nearest_refseq=NM_173752 | |nearest_refseq=NM_173752 | ||
|nearest_unigene=Mm.76694 | |nearest_unigene=Mm.76694 | ||
− | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=20831060 | |start=20831060 |
Revision as of 16:36, 19 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 20831067 |
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End of the center position in the TSS region: | 20831068 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | BC019131 |
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Distance: | 4 |
Num_trans: | 9 |
All_trans: | BC019131:4 ENSMUST00000047028.8:5 ENSMUST00000154300.7:5 AK167557:21 NM_173752:-34 ENSMUST00000132928.1:39 AK041053:39 AK156350:-162 ENSMUST00000144441.7:306 |
TATA-Box annotation
Distance to TSS: | 41 |
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Nearest PromoterID: | NM_173752 |
Entrez ID: | 216551 |
Nearest Unigene: | Mm.76694 |
Nearest Refseq: | NM_173752 |
Nearest Ensembl: | ENSMUSG00000042363 |
Gene Name: | lectin, galactoside binding-like |
Gene Alias: | 1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla |
Gene Description: | lectin, galactoside binding-like |
Gene Type: | protein-coding |
CpG%: | 0.185 |
GC%: | 0.80597 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |